Pre_GI: BLASTP Hits

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Query: NC_010793:1158279:1162791 Orientia tsutsugamushi str. Ikeda, complete genome

Start: 1162791, End: 1165196, Length: 2406

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010793:1811401:1869177186917718715432367Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA01619
NC_010793:1468849:1475436147543614782402805Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA01410
NC_010793:1695716:1702951170295117046991749Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA01072
NC_010793:1695716:1698219169821917002312013Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA0890
NC_017044:702483:7137857137857179214137Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugal transfer protein TraA0746
NC_017028:1030000:1046311104631110504474137Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA0740
NC_010793:1922000:1933705193370519347961092Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA0677
NC_010793:1922000:195975719597571960581825Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA7e-138491
NC_010793:357000:366295366295367119825Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA2e-137489
NC_010793:541040:5689105689105702081299Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-131471
NC_010793:357000:3642693642693655851317Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA2e-131470
NC_010793:541040:567376567376568158783Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA6e-129462
NC_010793:357000:365570365570366280711Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA2e-114414
NC_010793:541040:568215568215568925711Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA2e-114414
NC_010793:1695716:1704741170474117057571017Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA5e-74280
NC_010793:1287877:130243213024321302779348Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA3e-59230
NC_012796:1600600:1609788160978816126312844Desulfovibrio magneticus RS-1, complete genomeconjugal transfer protein TraA8e-56219
NC_010793:1811401:1866236186623618689082673Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI4e-55216
NC_010793:1158279:1165465116546511681372673Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI4e-55216
NC_010793:541040:5658955658955671091215Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI2e-52208
NC_014217:2020737:2020737202073720236942958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA4e-50200
NC_007925:138927:1633911633911664953105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein6e-50199
NC_014217:2760898:2762803276280327657602958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA2e-49198
NC_002678:763808:7856497856497886963048Mesorhizobium loti MAFF303099, complete genomeprobable conjugal transfer protein traA1e-48195
NC_014006:3124818:3167502316750231703452844Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TraA8e-48192
NC_015675:5607297:5632354563235456354013048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA8e-48192
NC_009720:464078:4822914822914852482958Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA1e-47192
NC_007958:4371125:4393639439363943967583120Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein1e-47191
NC_009720:251703:2737272737272766572931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA1e-46188
NC_009720:2945655:2945655294565529485852931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA1e-46188
NC_009445:6424000:6443614644361464466253012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA1e-46188
NC_009445:1316000:1316372131637213193262955Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA2e-46188
NC_015675:4565500:4576462457646245795093048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA5e-46186
NC_017028:1030000:103036510303651031309945Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA1e-45185
NC_015508:296856:2968562968563006473792Agrobacterium sp. H13-3 chromosome linear, complete sequenceConjugal transfer protein traA1e-45185
NC_009488:854500:870919870919871230312Orientia tsutsugamushi str. Boryong, complete genome6e-45183
NC_009445:838281:8382818382818412923012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA1e-44182
NC_010338:359940:3722873722873751452859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA8e-45182
NC_010338:1216385:1217970121797012208282859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA3e-44181
NC_014816:1592799:1592799159279915960233225Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceti-type conjugative transfer relaxase traa1e-43179
NC_007925:1085500:1087177108717710902813105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein3e-43177
NC_008435:1131242:1160526116052611635463021Rhodopseudomonas palustris BisA53, complete genomeMobA/MobL protein1e-42175
NC_011991:65368:6536865368694384071Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceTi-type conjugative transfer relaxase TraA3e-42174
NC_010793:357000:367385367385367942558Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI9e-37155
NC_010793:1287877:130276413027641302994231Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA4e-29130
NC_010943:3069082:3094419309441930971992781Stenotrophomonas maltophilia K279a, complete genomeputative conjugal transfer protein TraA1e-28128
NC_007802:3252300:327506632750663275869804Jannaschia sp. CCS1, complete genomeconjugal transfer protein traA1e-23112
NC_010793:1695716:170024617002461700437192Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA1e-23112
NC_012969:2136243:2176677217667721802433567Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeATP-dependent exoDNAse (exonuclease V) subunit alpha8e-24112
NC_013730:2359939:2384855238485523876142760Spirosoma linguale DSM 74, complete genomeconjugative relaxase domain protein2e-22108
NC_016585:116143:1339371339371372033267Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceputative ATP-dependent exoDNAse5e-21103
NC_016609:4233701:4273299427329942760132715Niastella koreensis GR20-10 chromosome, complete genomeconjugative relaxase domain-containing protein2e-20101
NC_009488:186000:226784226784227149366Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein7e-2099.8
NC_012483:3731542:3754841375484137575942754Acidobacterium capsulatum ATCC 51196, complete genomeconjugative relaxase domain protein7e-2099.8
NC_017955:3670670:3715007371500737204815475Modestobacter marinus, complete genomeDNA primase1e-1999
NC_013132:7954000:7969595796959579722072613Chitinophaga pinensis DSM 2588, complete genomeconjugative relaxase domain protein1e-1999
NC_010793:1922000:1957003195700319582081206Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI1e-1895.5
NC_010793:1468849:1472662147266214742241563Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI2e-1895.1
NC_009921:1611132:1633885163388516385344650Frankia sp. EAN1pec, complete genomeTrwC relaxase1e-1792.4
NC_017955:1667500:1668039166803916735375499Modestobacter marinus, complete genomeDNA primase2e-1792
NC_014215:1243125:1244941124494112479553015Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-1791.7
NC_010793:416849:4186654186654197831119Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI2e-1791.3
NC_016631:3917253:3931643393164339343962754Granulicella mallensis MP5ACTX8 chromosome, complete genomeconjugative relaxase domain-containing protein4e-1790.9
NC_007575:1694877:1701208170120817045463339Sulfurimonas denitrificans DSM 1251, complete genomeexonuclease V subunit alpha6e-1790.1
NC_009488:1952640:1967642196764219688111170Orientia tsutsugamushi str. Boryong, complete genome9e-1789.4
NC_013169:612456:6365886365886401423555Kytococcus sedentarius DSM 20547, complete genomeTrwC relaxase2e-1688.6
NC_012803:3691:3912039120426443525Micrococcus luteus NCTC 2665, complete genomeconjugative relaxase domain protein, TrwC/TraI family2e-1688.2
NC_009879:556000:563521563521563775255Rickettsia canadensis str. McKiel, complete genomeConjugal transfer protein TraA2e-1688.2
NC_010793:1508974:1511405151140515124751071Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI2e-1688.2
NC_009879:556000:564556564556564789234Rickettsia canadensis str. McKiel, complete genomeConjugal transfer protein TraA4e-1687.4
NC_010793:1695716:1701550170155017026201071Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI4e-1687.4
NC_011891:1225000:1242880124288012456602781Anaeromyxobacter dehalogenans 2CP-1, complete genomeconjugative relaxase domain protein7e-1686.7
NC_013757:780835:7808357808357863455511Geodermatophilus obscurus DSM 43160, complete genomeTrwC relaxase2e-1585.5
NC_011296:281930:2901722901722957035532Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein2e-1584.7
NC_012483:3672768:3676616367661636793962781Acidobacterium capsulatum ATCC 51196, complete genomeconjugative relaxase domain protein7e-1583.2
NC_016943:1442885:1442885144288514483835499Blastococcus saxobsidens DD2, complete genomeDNA primase1e-1482.8
NC_016943:1422926:1442885144288514483835499Blastococcus saxobsidens DD2, complete genomeDNA primase1e-1482.8
NC_008699:1673181:1673181167318116785745394Nocardioides sp. JS614, complete genomeDNA primase catalytic core, N-terminal domain3e-1481.3
NC_017955:3057592:3092495309249530980295535Modestobacter marinus, complete genomeDNA primase5e-1480.5
NC_008699:1816392:1829796182979618323962601Nocardioides sp. JS614, complete genomeATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like9e-1479.7
NC_016626:1751159:1751159175115917542153057Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative traC, type IV secretion system1e-1379.3
NC_010571:2423732:2437973243797324407052733Opitutus terrae PB90-1, complete genomeconjugative relaxase domain protein2e-1378.2
NC_013235:2129982:2155767215576721594623696Nakamurella multipartita DSM 44233, complete genomeTrwC relaxase3e-1377.8
NC_013422:991500:1012572101257210154032832Halothiobacillus neapolitanus c2, complete genomeconjugative relaxase domain protein3e-1377.8
NC_015713:2453409:2463825246382524652491425Simkania negevensis Z chromosome gsn.131, complete genomeexodeoxyribonuclease V subunit alpha4e-1377.4
NC_004460:708416:7159707159707217565787Vibrio vulnificus CMCP6 chromosome II, complete sequenceATP-dependent exoDNAse, alpha subunit1e-1275.9
NC_010793:1922000:193478319347831934944162Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA3e-1274.7
NC_008146:1535827:1553403155340315579744572Mycobacterium sp. MCS, complete genomeATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein3e-1274.3
NC_008705:1557711:1557711155771115622824572Mycobacterium sp. KMS, complete genomeATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein3e-1274.3
NC_010170:3944228:3975774397577439785002727Bordetella petrii, complete genomeconjugal transfer protein3e-1274.3
NC_019673:1988853:2027358202735820317464389Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein6e-1273.6
NC_013729:2258582:2280446228044622851314686Kribbella flavida DSM 17836, complete genomeTrwC relaxase7e-1273.2
NC_008278:6885254:6885254688525468896694416Frankia alni ACN14a, complete genomehypothetical protein; Putative conjugal transfer protein traA1e-1172.4
NC_009378:106193:1061931061931114335241Yersinia pestis Pestoides F plasmid MT, complete sequenceconjugal transfer nickase/helicase TraI1e-1172.4
NC_009484:2660048:2674385267438526771562772Acidiphilium cryptum JF-5 chromosome, complete genomeexonuclease V subunit alpha1e-1172.4
NC_015725:926824:9456689456689479382271Mycoplasma bovis Hubei-1 chromosome, complete genomeexodeoxyribonuclease V subunit alpha2e-1171.6
NC_016846:24500:4675446754520125259Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer nickase/helicase TraI6e-1170.5
NC_010510:339879:3631673631673647441578Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete8e-1169.7
NC_017319:192482:2005052005052039543450Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceOriT nicking and unwinding protein2e-1068.9
NC_010793:1695716:170047317004731700865393Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI1e-1068.9
NC_004851:191709:2005772005772040773501Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceoriT nicking and unwinding protein2e-1068.6
NC_007607:87000:96517965171007104194Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceoriT nicking and unwinding protein, fragment2e-1068.6
NC_014666:8459724:8473764847376484785034740Frankia sp. EuI1c chromosome, complete genomeTrwC relaxase2e-1068.6
NC_007608:97092:1033061033061082044899Shigella boydii Sb227 plasmid pSB4_227, complete sequenceoriT nicking and unwinding protein, fragment2e-1068.6
NC_010660:175200:1832651832651882354971Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence2e-1068.6
NC_009007:57804:7601176011793463336Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraI3e-1067.8
NC_007385:157516:1693421693421736254284Shigella sonnei Ss046 plasmid pSS_046, complete sequenceoriT nicking and unwinding protein, fragment3e-1067.8
NC_014830:3387479:3426762342676234300523291Intrasporangium calvum DSM 43043 chromosome, complete genomeTrwC relaxase6e-1067
NC_015458:327009:3562813562813591782898Pusillimonas sp. T7-7 chromosome, complete genomeTrwC7e-1066.6
NC_017337:16000:3454134541372702730Staphylococcus aureus subsp. aureus ED133 chromosome, completeputative helicase1e-0966.2
NC_014819:25765:4311743117462603144Asticcacaulis excentricus CB 48 plasmid pASTEX02, completeconjugative relaxase domain protein4e-0963.9
NC_014550:3316115:3319383331938333220312649Arthrobacter arilaitensis Re117, complete genome4e-0963.9
NC_006085:925604:9256049256049272951692Propionibacterium acnes KPA171202, complete genometransfer protein homolog TraA9e-0962.8
NC_008609:1976403:2006218200621820084042187Pelobacter propionicus DSM 2379, complete genomehelicase, RecD/TraA family1e-0862.8
NC_015850:1006980:1016198101619810193653168Acidithiobacillus caldus SM-1 chromosome, complete genomeputative TraI protein1e-0862.4
NC_015377:34445:5672856728596222895Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequenceTrwC protein2e-0862
NC_002179:667182:6852326852326874302199Chlamydophila pneumoniae AR39, complete genomeexodeoxyribonuclease V, alpha subunit2e-0861.6
NC_017285:671546:6896006896006917982199Chlamydophila pneumoniae LPCoLN chromosome, complete genomeRecD/TraA family helicase2e-0861.6
NC_009998:62000:6726667266732265961Shewanella baltica OS195 plasmid pS19501, complete sequenceconjugative transfer relaxase protein TraI3e-0861.2
NC_015671:557720:5632625632625661532892Cellvibrio gilvus ATCC 13127 chromosome, complete genomeTrwC relaxase3e-0861.2
NC_009921:3098271:3124646312464631273542709Frankia sp. EAN1pec, complete genomehelicase, putative6e-0860.1
NC_009338:2925286:2944475294447529503425868Mycobacterium gilvum PYR-GCK chromosome, complete genomeexonuclease V subunit alpha2e-0758.2
NC_010793:81219:8427684276864712196Orientia tsutsugamushi str. Ikeda, complete genomeexodeoxyribonuclease V alpha subunit3e-0758.2
NC_012724:2547500:2582526258252625841331608Burkholderia glumae BGR1 chromosome 1, complete genome3e-0757.8
NC_011916:467106:4887684887684915782811Caulobacter crescentus NA1000 chromosome, complete genomeDNA relaxase/conjugal transfer nickase-helicase TrwC5e-0757.4
NC_008726:3968222:3968222396822239740805859Mycobacterium vanbaalenii PYR-1, complete genomeATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like6e-0757
NC_010814:1441327:1446527144652714501713645Geobacter lovleyi SZ, complete genomeExodeoxyribonuclease V5e-0757
NC_008697:118859:1188591188591247625904Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceDNA primase catalytic core, N-terminal domain5e-0757
NC_007722:168937:1893461893461922582913Erythrobacter litoralis HTCC2594, complete genomeTrwC protein6e-0756.6
NC_011772:4321117:4336135433613543384712337Bacillus cereus G9842, complete genomeputative helicase8e-0756.6
NC_010184:4219257:4234557423455742368932337Bacillus weihenstephanensis KBAB4, complete genomehelicase, RecD/TraA family9e-0756.2
NC_014335:4113154:4129812412981241321482337Bacillus cereus biovar anthracis str. CI chromosome, completeRecD/TraA family helicase1e-0655.8
NC_011658:4171237:4188885418888541912212337Bacillus cereus AH187 chromosome, complete genomeputative helicase1e-0655.8
NC_011969:4065460:4084245408424540865812337Bacillus cereus Q1 chromosome, complete genomeexodeoxyribonuclease v, alpha subunit1e-0655.8
NC_017200:4191963:4208883420888342112192337Bacillus thuringiensis serovar finitimus YBT-020 chromosome,exodeoxyribonuclease V subunit alpha1e-0655.8
NC_007530:4176462:4198106419810642004182313Bacillus anthracis str. 'Ames Ancestor', complete genomehelicase, putative1e-0655.8
NC_005957:4169610:4187265418726541896012337Bacillus thuringiensis serovar konkukian str. 97-27, completeexodeoxyribonuclease V, alpha subunit1e-0655.5
NC_007722:2954876:2959510295951029620652556Erythrobacter litoralis HTCC2594, complete genomehypothetical protein3e-0654.7
NC_009879:556000:564150564150564296147Rickettsia canadensis str. McKiel, complete genomeConjugal transfer protein TraA3e-0654.7
NC_010510:339879:369083369083369907825Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete3e-0654.7
NC_013131:10370765:1038668610386686103908464161Catenulispora acidiphila DSM 44928, complete genomeTrwC relaxase5e-0653.9
NC_009879:556000:565561565561566427867Rickettsia canadensis str. McKiel, complete genomeConjugal transfer protein TraA5e-0653.9
NC_010793:1922000:193498219349821935533552Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraI6e-0653.5
UCMB5137:174593:1916811916811942542574Bacillus atrophaeus UCMB-5137unknown8e-0653.1