Pre_GI: BLASTN Hits

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Query: NC_010741:949732 Treponema pallidum subsp. pallidum SS14, complete genome

Start: 949732, End: 971742, Length: 22011

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Treponema pallidum subsp. pallidum SS14 was isolated in 1977 from a patient with secondary syphilis. This strain is less susceptible than the Nichols strain for a number of antibiotics. This organisms is divided into subspecies each of which causes a specific disease. This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_000919:948287*94828797029722011Treponema pallidum subsp. pallidum str. Nichols, complete genome023320BLASTN svgBLASTP svg
NC_015714:943178*94317896120118024Treponema paraluiscuniculi Cuniculi A chromosome, complete genome022900BLASTN svgBLASTP svg
NC_014501:58328795832879585675123873Cyanothece sp. PCC 7822 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019970:1343670*1343670136621022541Thermoanaerobacterium thermosaccharolyticum M0795, complete genome7e-0763.9BLASTN svgBLASTP svg