Pre_GI: BLASTP Hits

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Query: NC_010741:949732:968837 Treponema pallidum subsp. pallidum SS14, complete genome

Start: 968837, End: 969217, Length: 381

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Treponema pallidum subsp. pallidum SS14 was isolated in 1977 from a patient with secondary syphilis. This strain is less susceptible than the Nichols strain for a number of antibiotics. This organisms is divided into subspecies each of which causes a specific disease. This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021508:949769:968874968874969254381Treponema pallidum subsp. pallidum SS14, complete genomeribosome-binding factor A3e-68256
NC_017268:949543:968648968648969028381Treponema pallidum subsp. pallidum str. Chicago chromosome,ribosome-binding factor A3e-68256
NC_016844:950231:969336969336969716381Treponema pallidum subsp. pallidum DAL-1 chromosome, completeribosome-binding factor A3e-68256
NC_000919:948287:967392967392967772381Treponema pallidum subsp. pallidum str. Nichols, complete genomeribosome-binding factor A (rbfA)3e-68256
NC_012472:3661912:366898536689853669341357Bacillus cereus 03BB102, complete genomeribosome-binding factor A7e-1579.3
NC_006274:3697255:370470537047053705061357Bacillus cereus E33L, complete genomeribosome-binding factor A7e-1579.3
NC_005957:3638750:364582336458233646179357Bacillus thuringiensis serovar konkukian str. 97-27, completeribosome-binding factor A7e-1579.3
NC_014335:3567931:357500435750043575360357Bacillus cereus biovar anthracis str. CI chromosome, completeribosome-binding factor A7e-1579.3
NC_008600:3643905:365097836509783651334357Bacillus thuringiensis str. Al Hakam, complete genomeribosome-binding factor A7e-1579.3
NC_016779:3579743:358681635868163587172357Bacillus cereus F837/76 chromosome, complete genomeRibosome-binding factor A7e-1579.3
NC_011772:3787500:379458137945813794937357Bacillus cereus G9842, complete genomeribosome-binding factor A9e-1579
NC_010184:3675424:368290436829043683260357Bacillus weihenstephanensis KBAB4, complete genomeribosome-binding factor A9e-1579
NC_004722:3777907:378498037849803785336357Bacillus cereus ATCC 14579, complete genomeribosome-binding factor A9e-1579
NC_011725:3821789:382886538288653829221357Bacillus cereus B4264 chromosome, complete genomeribosome-binding factor A9e-1579
NC_014171:3701051:370812537081253708481357Bacillus thuringiensis BMB171 chromosome, complete genomeribosome-binding factor A9e-1579
NC_017208:3816753:382421538242153824571357Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeribosome-binding factor A9e-1579
NC_011773:3651963:365903636590363659392357Bacillus cereus AH820 chromosome, complete genomeribosome-binding factor A1e-1478.6
NC_010001:3369500:337667333766733377083411Clostridium phytofermentans ISDg, complete genomeribosome-binding factor A1e-1478.6
NC_017200:3655496:366588236658823666238357Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ribosome-binding factor A1e-1478.6
NC_019970:1343670:135106213510621351421360Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribosome-binding factor A1e-1478.6
NC_014152:1430156:144493014449301445292363Thermincola sp. JR, complete genomeribosome-binding factor A1e-1478.2
NC_009674:2551759:255888025588802559236357Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeribosome-binding factor A1e-1478.2
NC_011969:3549000:355615835561583556514357Bacillus cereus Q1 chromosome, complete genomeribosome-binding factor a2e-1477.8
NC_003909:3587695:359688335968833597239357Bacillus cereus ATCC 10987, complete genomeribosome-binding factor A2e-1477.8
NC_016627:2799453:281620028162002816547348Clostridium clariflavum DSM 19732 chromosome, complete genomeribosome-binding factor A2e-1477.4
NC_011658:3603009:361219636121963612552357Bacillus cereus AH187 chromosome, complete genomeribosome-binding factor A2e-1477.4
NC_016771:3555506:356469335646933565049357Bacillus cereus NC7401, complete genomeribosome-binding factor A2e-1477.4
NC_011999:936500:946062946062946406345Macrococcus caseolyticus JCSC5402, complete genomeribosome-binding factor A2e-1477.4
NC_004461:921364:951699951699952049351Staphylococcus epidermidis ATCC 12228, complete genomeribosome-binding factor A4e-1477
NC_007907:2879568:288240728824072882784378Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1375.5
NC_011830:3904034:390969439096943910071378Desulfitobacterium hafniense DCB-2, complete genomeribosome-binding factor A1e-1375.5
NC_014103:3985897:399506039950603995425366Bacillus megaterium DSM319 chromosome, complete genomeribosome-binding factor A9e-1475.5
NC_004129:957890:976043976043976444402Pseudomonas fluorescens Pf-5, complete genomeribosome-binding factor A9e-1475.5
NC_011728:832073:843138843138843500363Borrelia burgdorferi ZS7, complete genomeribosome-binding factor A1e-1375.1
NC_012659:3617000:362417936241793624535357Bacillus anthracis str. A0248, complete genomeribosome-binding factor A1e-1374.7
NC_007530:3616828:362427936242793624635357Bacillus anthracis str. 'Ames Ancestor', complete genomeribosome-binding factor A1e-1374.7
NC_003997:3617000:362415236241523624508357Bacillus anthracis str. Ames, complete genomeribosome-binding factor A1e-1374.7
NC_005945:3615623:362484736248473625203357Bacillus anthracis str. Sterne, complete genomeribosome-binding factor A1e-1374.7
NC_011898:513835:526895526895527248354Clostridium cellulolyticum H10, complete genomeribosome-binding factor A1e-1374.7
NC_012121:897866:915362915362915709348Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative ribosome-binding factor A2e-1374.3
NC_017353:1699652:170622417062241706571348Staphylococcus lugdunensis N920143, complete genomeputative ribosome-binding factor A3e-1373.9
NC_011244:863306:871126871126871515390Borrelia recurrentis A1, complete genomeribosome-binding factor A3e-1373.9
NC_014387:1175927:118944811894481189876429Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeribosome-binding factor A RbfA3e-1373.6
NC_012880:3915500:391701339170133917411399Dickeya dadantii Ech703, complete genomeribosome-binding factor A4e-1373.2
NC_013861:311908:331330331330331695366Legionella longbeachae NSW150, complete genomeRibosome-binding factor A8e-1372.4
NC_013216:3376186:338631833863183386677360Desulfotomaculum acetoxidans DSM 771, complete genomeribosome-binding factor A1e-1271.6
NC_010516:2511035:253632225363222536684363Clostridium botulinum B1 str. Okra, complete genomeribosome-binding factor A1e-1271.6
NC_010520:2585014:261085326108532611215363Clostridium botulinum A3 str. Loch Maree, complete genomeribosome-binding factor A2e-1271.2
NC_017179:1378875:139060613906061390986381Clostridium difficile BI1, complete genomeribosome-binding factor A2e-1270.9
NC_013315:1370000:138083213808321381212381Clostridium difficile CD196 chromosome, complete genomeribosome-binding factor A2e-1270.9
NC_020134:1173000:118242711824271182777351Clostridium stercorarium subsp. stercorarium DSM 8532, completeribosome-binding factor A4e-1270.1
NC_012658:2584355:260629526062952606657363Clostridium botulinum Ba4 str. 657 chromosome, complete genomeribosome-binding factor A6e-1269.3
NC_014376:3214222:322095932209593221321363Clostridium saccharolyticum WM1 chromosome, complete genomeribosome-binding factor A6e-1269.3
NC_006369:3058000:306698330669833067354372Legionella pneumophila str. Lens, complete genomeRibosome-binding factor A1e-1168.6
NC_009698:2367171:239246723924672392829363Clostridium botulinum A str. Hall chromosome, complete genomeribosome-binding factor A2e-1168.2
NC_009697:2394826:242012224201222420484363Clostridium botulinum A str. ATCC 19397 chromosome, completeribosome-binding factor A2e-1168.2
NC_009495:2524000:254809925480992548461363Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeribosome-binding factor A2e-1168.2
NC_012563:2721658:272261027226102722972363Clostridium botulinum A2 str. Kyoto, complete genomeribosome-binding factor A2e-1168.2
NC_007622:1214629:122828712282871228637351Staphylococcus aureus RF122, complete genomeribosome-binding factor A2e-1167.8
NC_002952:1291444:130510213051021305452351Staphylococcus aureus subsp. aureus MRSA252, complete genomeribosome-binding factor A2e-1167.8
NC_009782:1327340:134099713409971341347351Staphylococcus aureus subsp. aureus Mu3, complete genomeribosome-binding factor A2e-1167.8
NC_017338:1234077:124542512454251245775351Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeribosome-binding factor A (P15B PROTEIN)2e-1167.8
NC_017341:1291583:130519813051981305590393Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ribosome-binding factor A (P15B PROTEIN)2e-1167.8
NC_008262:1835613:185091218509121851262351Clostridium perfringens SM101, complete genomeribosome-binding factor A2e-1167.4
NC_016632:74569:843838438384793411Serratia symbiotica str. 'Cinara cedri' chromosome, completeribosome-binding factor A3e-1167.4
NC_013943:1381000:139257613925761392908333Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeribosome-binding factor A3e-1167.4
NC_012560:4311906:431883143188314319220390Azotobacter vinelandii DJ, complete genomeribosome-binding factor A4e-1167
NC_021150:4311902:431882743188274319216390Azotobacter vinelandii CA6, complete genomeribosome-binding factor A4e-1167
NC_015672:1566565:157549715754971575859363Flexistipes sinusarabici DSM 4947 chromosome, complete genomeribosome-binding factor A6e-1166.2
NC_020291:1464500:147258414725841472934351Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeribosome-binding factor A8e-1165.5
NC_007645:1245927:125429212542921254699408Hahella chejuensis KCTC 2396, complete genomeribosome-binding factor A9e-1165.5
NC_009483:2201986:220643722064372206805369Geobacter uraniireducens Rf4 chromosome, complete genomeribosome-binding factor A1e-1065.1
NC_004344:257471:264696264696265073378Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-1065.1
NC_014328:1405484:141450314145031414868366Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeribosome-binding factor A2e-1064.3
NC_017516:917817:932901932901933272372Neisseria meningitidis H44/76 chromosome, complete genomeribosome-binding factor A3e-1063.9
NC_017505:1338661:134487613448761345247372Neisseria meningitidis alpha710 chromosome, complete genomeribosomal-binding factor A5e-1063.2
NC_013939:1535071:154394815439481544295348Deferribacter desulfuricans SSM1, complete genomeribosome-binding factor A5e-1063.2
NC_015589:1899329:191995519199551920317363Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeribosome-binding factor A5e-1063.2
NC_003116:1488576:149217314921731492544372Neisseria meningitidis Z2491, complete genomeribosome-binding factor A4e-1063.2
NC_017512:1264542:126813912681391268510372Neisseria meningitidis WUE 2594, complete genomeribosome-binding factor A4e-1063.2
NC_017517:1377617:138189313818931382264372Neisseria meningitidis M01-240355 chromosome, complete genomeribosome-binding factor A4e-1063.2
NC_013016:1257942:126421012642101264581372Neisseria meningitidis alpha14 chromosome, complete genomeribosome-binding factor A6e-1062.8
NC_011035:1033942:103821310382131038584372Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeribosome-binding factor A7e-1062.8
NC_002946:618439:634076634076634447372Neisseria gonorrhoeae FA 1090, complete genomeribosome-binding factor A8e-1062.4
NC_017511:950411:954043954043954414372Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeribosome-binding factor A9e-1062.4
NC_015318:706374:718307718307718708402Hippea maritima DSM 10411 chromosome, complete genomeRibosome-binding factor A1e-0962
NC_004342:929033:939740939740940093354Leptospira interrogans serovar Lai str. 56601 chromosome I,ribosome binding factor A2e-0960.8
NC_009253:2139379:214653921465392146901363Desulfotomaculum reducens MI-1 chromosome, complete genomeribosome-binding factor A3e-0960.8
NC_005823:3280000:328971032897103290063354Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130ribosomal-binding factor A6e-0959.7
NC_014657:944000:958401958401958802402Caldicellulosiruptor owensensis OL chromosome, complete genomeribosome-binding factor a7e-0959.3
NC_014098:1553900:155354415535441553903360Bacillus tusciae DSM 2912 chromosome, complete genomeribosome-binding factor A9e-0958.9
NC_021175:1597613:161702316170231617373351Streptococcus oligofermentans AS 1.3089, complete genomeribosome-binding factor A2e-0857.8
NC_016603:3475843:348437734843773484778402Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeribosome-binding factor A2e-0857.8
NC_016893:563890:578339578339578692354Wigglesworthia glossinidia endosymbiont of Glossina morsitans30s ribosome binding factor3e-0857.4
NC_005061:96536:115697115697116050354Candidatus Blochmannia floridanus, complete genomeribosome-binding factor A (P15B protein)4e-0856.6
NC_009009:1876367:189090518909051891255351Streptococcus sanguinis SK36, complete genomeRibosome-binding factor A, putative7e-0856.2
NC_002528:404545:415223415223415585363Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeribosome-binding factor A7e-0855.8
NC_011295:847903:849080849080849493414Coprothermobacter proteolyticus DSM 5265, complete genomeribosome-binding factor A7e-0855.8
NC_011528:535680:551729551729552088360Coxiella burnetii CbuK_Q154, complete genomeribosome-binding factor A1e-0755.5
NC_002971:1379567:138182813818281382187360Coxiella burnetii RSA 493, complete genomeribosome-binding factor A1e-0755.5
NC_010117:1461502:146240914624091462768360Coxiella burnetii RSA 331, complete genomeribosome-binding factor A1e-0755.5
NC_011527:525759:545092545092545451360Coxiella burnetii CbuG_Q212, complete genomeribosome-binding factor A1e-0755.1
NC_015696:517941:546773546773547204432Francisella sp. TX077308 chromosome, complete genomeribosome-binding factor A2e-0754.7
NC_014218:696409:699758699758700246489Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosome-binding factor A5e-0753.1
NC_010336:996661:102532410253241025755432Francisella philomiragia subsp. philomiragia ATCC 25017, completeribosome-binding factor A6e-0752.8
NC_008601:1733940:177265817726581773089432Francisella tularensis subsp. novicida U112, complete genomeribosome-binding factor A7e-0752.8
NC_017259:388000:397892397892398251360Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,ribosome-binding factor A3e-0650.4