Pre_GI: BLASTN Hits

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Query: NC_010729:1462135 Porphyromonas gingivalis ATCC 33277, complete genome

Start: 1462135, End: 1486585, Length: 24451

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain was isolated from human gingiva. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010729:225616*22561624523819623Porphyromonas gingivalis ATCC 33277, complete genome02557BLASTN svgBLASTP svg
NC_015571:20440002044000210147957480Porphyromonas gingivalis TDC60, complete genome02462BLASTN svgBLASTP svg
NC_010729:619664*61966465510835445Porphyromonas gingivalis ATCC 33277, complete genome02442BLASTN svgBLASTP svg
NC_010729:2147268*2147268216760520338Porphyromonas gingivalis ATCC 33277, complete genome02434BLASTN svgBLASTP svg
NC_010729:1179008*1179008120985230845Porphyromonas gingivalis ATCC 33277, complete genome02430BLASTN svgBLASTP svg
NC_002950:20956920956923197022402Porphyromonas gingivalis W83, complete genome02430BLASTN svgBLASTP svg
NC_010729:1549744*1549744156891619173Porphyromonas gingivalis ATCC 33277, complete genome02428BLASTN svgBLASTP svg
NC_002950:879930*87993091309933170Porphyromonas gingivalis W83, complete genome02426BLASTN svgBLASTP svg
NC_002950:1511955*1511955156159949645Porphyromonas gingivalis W83, complete genome02426BLASTN svgBLASTP svg
NC_002950:12701321270132129604725916Porphyromonas gingivalis W83, complete genome02422BLASTN svgBLASTP svg
NC_010729:10149571014957103460619650Porphyromonas gingivalis ATCC 33277, complete genome02418BLASTN svgBLASTP svg
NC_015571:2002489*2002489204114838660Porphyromonas gingivalis TDC60, complete genome02399BLASTN svgBLASTP svg
NC_015571:290355*29035531493124577Porphyromonas gingivalis TDC60, complete genome02375BLASTN svgBLASTP svg
NC_002950:20984542098454211748919036Porphyromonas gingivalis W83, complete genome02373BLASTN svgBLASTP svg
NC_015571:41115641115643280321648Porphyromonas gingivalis TDC60, complete genome02095BLASTN svgBLASTP svg
NC_019968:382991*38299145725074260Prevotella dentalis DSM 3688 chromosome 2, complete sequence8e-1073.8BLASTN svgBLASTP svg
NC_015571:1265121*1265121128814623026Porphyromonas gingivalis TDC60, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002950:1334500*1334500135659922100Porphyromonas gingivalis W83, complete genome5e-0867.9BLASTN svgBLASTP svg