Pre_GI: BLASTP Hits

Some Help

Query: NC_010729:2147268:2152506 Porphyromonas gingivalis ATCC 33277, complete genome

Start: 2152506, End: 2152943, Length: 438

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain was isolated from human gingiva. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015571:260664:264591264591265028438Porphyromonas gingivalis TDC60, complete genomehypothetical protein5e-73272
NC_002950:2068500:207352920735292073972444Porphyromonas gingivalis W83, complete genomehypothetical protein1e-59227
NC_014220:1401065:140821514082151408637423Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeCRISPR-associated Cmr5 family protein2e-0651.6