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Query: NC_010729:1818500:1834485 Porphyromonas gingivalis ATCC 33277, complete genome

Start: 1834485, End: 1834814, Length: 330

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain was isolated from human gingiva. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002950:353549:357149357149357478330Porphyromonas gingivalis W83, complete genomehypothetical protein2e-58224
NC_015571:1495286:149528614952861495615330Porphyromonas gingivalis TDC60, complete genomehypothetical protein2e-58223
NC_007644:2099878:210625021062502106594345Moorella thermoacetica ATCC 39073, complete genomeCupin region1e-26118
NC_014973:4630132:465282846528284653160333Geobacter sp. M18 chromosome, complete genomeCupin 2 barrel domain-containing protein4e-26116
NC_008346:2251353:226402922640292264364336Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein1e-25115
NC_011146:482440:488107488107488439333Geobacter bemidjiensis Bem, complete genomeCupin 2 conserved barrel domain protein1e-25114
NC_014314:238043:255725255725256066342Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completecupin 2 conserved barrel domain-containing protein4e-23106
NC_007498:1148249:116663211666321166985354Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein1e-22105
NC_021182:3525523:354105135410513541386336Clostridium pasteurianum BC1, complete genomecupin domain-containing protein4e-22103
NC_011837:56000:613656136561712348Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-1992.8
NC_009706:56000:613656136561712348Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein6e-1992.8
NC_013192:107672:109694109694110368675Leptotrichia buccalis DSM 1135, complete genomeCupin 2 conserved barrel domain protein6e-1786.3
NC_013928:797714:798522798522798869348Streptococcus mutans NN2025, complete genomehypothetical protein2e-1477.8
NC_014246:676570:681889681889682239351Mobiluncus curtisii ATCC 43063 chromosome, complete genomecupin 2 conserved barrel protein4e-1270.1
NC_012032:398419:417428417428417748321Chloroflexus sp. Y-400-fl, complete genomeCupin 2 conserved barrel domain protein2e-1064.7
NC_010175:398453:417462417462417782321Chloroflexus aurantiacus J-10-fl, complete genomeCupin 2 conserved barrel domain protein2e-1064.7
NC_011593:1830500:183276518327651833379615Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein3e-0960.5
NC_017219:1830353:183255518325551833169615Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein3e-0960.5
NC_017218:1166844:116904611690461169660615Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomecupin domain-containing protein3e-0960.5
NC_013665:1865122:187370218737021874007306Methanocella paludicola SANAE, complete genomehypothetical protein2e-0651.2
NC_014830:3156873:315939231593923159733342Intrasporangium calvum DSM 43043 chromosome, complete genomeCupin 2 conserved barrel domain protein3e-0650.4
NC_010545:619346:633449633449633838390Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein7e-0649.3