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Query: NC_010729:1344903:1351855 Porphyromonas gingivalis ATCC 33277, complete genome

Start: 1351855, End: 1355046, Length: 3192

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain was isolated from human gingiva. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015660:2685842:2692317269231726954633147Geobacillus thermoglucosidasius C56-YS93 chromosome, completehypothetical protein2e-179630
NC_020209:3874844:3892068389206838953403273Pseudomonas poae RE*1-1-14, complete genomeATP-binding protein4e-172605
NC_012673:1046016:1055557105555710588023246Exiguobacterium sp. AT1b, complete genomeputative ATP-binding protein5e-171602
NC_007481:3167434:3172649317264931758883240Pseudoalteromonas haloplanktis TAC125 chromosome I, completeATP-binding protein5e-166585
NC_015381:1588742:1616004161600416192823279Burkholderia gladioli BSR3 chromosome 1, complete sequenceATP-binding protein2e-165583
NC_007969:1076287:1088790108879010920623273Psychrobacter cryohalolentis K5, complete genomeputative ATP-binding protein3e-163576
NC_003909:1139556:1143260114326011459682709Bacillus cereus ATCC 10987, complete genomehypothetical protein9e-55216
NC_017068:1450049:1463663146366314671003438Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein3e-54214
NC_011831:1610346:1614918161491816176532736Chloroflexus aggregans DSM 9485, complete genomeprotein of unknown function DUF877e-45183
NC_011831:1336779:1346598134659813493902793Chloroflexus aggregans DSM 9485, complete genomehypothetical protein7e-41170
NC_013967:2103968:2155355215535521573521998Haloferax volcanii DS2 chromosome, complete genomeprobable ATP-binding protein2e-1998.6
NC_008212:2591750:2608586260858626105351950Haloquadratum walsbyi DSM 16790, complete genomehypothetical protein3e-1791.3
NC_013769:1341438:1368779136877913717963018Sulfolobus islandicus L.D.8.5 chromosome, complete genomeATPase AAA5e-1584
NC_009440:2151638:2164325216432521659261602Metallosphaera sedula DSM 5348 chromosome, complete genomeATPase-like protein2e-1482
NC_015931:71361:9319293192947601569Pyrolobus fumarii 1A, complete genomehypothetical protein1e-0966.2
NC_015320:1342105:1380643138064313822201578Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein2e-0862
NC_014160:748743:7835657835657851061542Thermosphaera aggregans DSM 11486 chromosome, complete genomehypothetical protein3e-0861.6
NC_000868:1168819:1173575117357511752211647Pyrococcus abyssi GE5, complete genomehypothetical protein1e-0656.6