Pre_GI: BLASTP Hits

Some Help

Query: NC_010729:1179008:1190495 Porphyromonas gingivalis ATCC 33277, complete genome

Start: 1190495, End: 1191574, Length: 1080

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain was isolated from human gingiva. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013741:1068170:1086027108602710874151389Archaeoglobus profundus DSM 5631, complete genomeRadical SAM domain protein9e-1168.2
NC_008701:37219:4525245252464211170Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein2e-1067
NC_003552:661579:6772296772296782781050Methanosarcina acetivorans C2A, complete genomeheme d1 biosynthesis protein NirJ7e-1065.1
NC_011126:281926:3003313003313014071077Hydrogenobaculum sp. Y04AAS1, complete genomeRadical SAM domain protein2e-0963.5
NC_018876:2380018:2394099239409923951541056Methanolobus psychrophilus R15 chromosome, complete genomeradical SAM family Fe-S protein3e-0963.2
NC_002754:1661000:1665410166541016665461137Sulfolobus solfataricus P2, complete genomeCoenzyme PQQ synthesis protein E (pqqE-4)4e-0962.8
NC_010001:3421710:344193634419363442688753Clostridium phytofermentans ISDg, complete genomepyruvate formate-lyase activating enzyme1e-0860.8
NC_014844:2158318:2171174217117421722441071Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein1e-0860.8
NC_012623:1631985:1631985163198516331211137Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein2e-0860.5
NC_012622:940990:9590429590429601781137Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein2e-0860.5
NC_020389:1777409:179374717937471794421675Methanosarcina mazei Tuc01, complete genomeRadical SAM domain heme biosynthesis protein5e-0859.3
NC_012470:1946968:1963790196379019649081119Streptococcus equi subsp. zooepidemicus, complete genomeRadical SAM superfamily protein5e-0859.3
NC_015320:790137:8092578092578104171161Archaeoglobus veneficus SNP6 chromosome, complete genomeRadical SAM domain-containing protein7e-0858.5
NC_019977:828427:8429508429508441071158Methanomethylovorans hollandica DSM 15978, complete genomeputative heme d1 biosynthesis radical SAM protein NirJ27e-0858.5
NC_014391:1910273:194082619408261941737912Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeradical SAM domain-containing protein9e-0858.2
NC_015275:1223088:124302112430211243746726Clostridium lentocellum DSM 5427 chromosome, complete genomepyruvate formate-lyase activating enzyme2e-0757
NC_015589:1630461:1651864165186416530301167Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRadical SAM domain-containing protein3e-0756.6
NC_014376:317312:336200336200336973774Clostridium saccharolyticum WM1 chromosome, complete genomepyruvate formate-lyase activating enzyme4e-0756.2
NC_008209:1097607:1112322111232211134281107Roseobacter denitrificans OCh 114, complete genomecoenzyme PQQ biosynthesis protein E9e-0754.7
NC_015416:1039144:104021210402121041177966Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein1e-0654.3
NC_013939:1460142:1471512147151214725761065Deferribacter desulfuricans SSM1, complete genomeradical SAM domain protein2e-0653.9
NC_002689:309940:3114263114263124361011Thermoplasma volcanium GSS1, complete genomePredicted heme d1 biosynthesis protein (NirJ-related)2e-0653.5
NC_014376:869749:8784128784128794551044Clostridium saccharolyticum WM1 chromosome, complete genomeRadical SAM domain protein4e-0652.8
NC_013665:849508:8817538817538828531101Methanocella paludicola SANAE, complete genomehypothetical protein5e-0652.4