Pre_GI: BLASTN Hits

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Query: NC_010723:833870 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 833870, End: 856865, Length: 22996

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010674:85839785839787856720171Clostridium botulinum B str. Eklund 17B, complete genome05949BLASTN svgBLASTP svg
NC_020291:4903981*4903981494131537335Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome0672BLASTN svgBLASTP svg
NC_008593:11032931103293112464521353Clostridium novyi NT, complete genome4e-119436BLASTN svgBLASTP svg
NC_010520:28609602860960288097120012Clostridium botulinum A3 str. Loch Maree, complete genome7e-81309BLASTN svgBLASTP svg
NC_021182:2883716*2883716290856724852Clostridium pasteurianum BC1, complete genome2e-69272BLASTN svgBLASTP svg
NC_014328:1135854*1135854115915023297Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-59238BLASTN svgBLASTP svg
NC_019978:62547662547664529019815Halobacteroides halobius DSM 5150, complete genome1e-26129BLASTN svgBLASTP svg
NC_018664:16633241663324168566922346Clostridium acidurici 9a chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_004344:26828*268286612639299Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,1e-1179.8BLASTN svgBLASTP svg
NC_014150:446359*44635946998023622Brachyspira murdochii DSM 12563 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009012:57414557414559944025296Clostridium thermocellum ATCC 27405, complete genome3e-0661.9BLASTN svgBLASTP svg