Pre_GI: BLASTP Hits

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Query: NC_010723:915697:929254 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 929254, End: 930312, Length: 1059

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020291:795500:8535298535298545721044Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage Mu protein-like protein gp473e-118424
NC_018515:3411276:3424912342491234259491038Desulfosporosinus meridiei DSM 13257 chromosome, complete genomephage Mu protein gp47-like protein4e-68258
NC_014376:1472304:1506656150665615076661011Clostridium saccharolyticum WM1 chromosome, complete genomeBaseplate J family protein1e-61237
NC_014652:801653:8283658283658294471083Caldicellulosiruptor hydrothermalis 108 chromosome, completebaseplate j family protein3e-58226
NC_013406:6052913:6052913605291360539711059Paenibacillus sp. Y412MC10 chromosome, complete genomeBaseplate J family protein2e-57223
NC_009617:1085000:1103558110355811046251068Clostridium beijerinckii NCIMB 8052 chromosome, complete genomebaseplate J family protein6e-53208
NC_007907:4500000:4515740451574045168191080Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-48191
NC_011830:1504497:1524116152411615251951080Desulfitobacterium hafniense DCB-2, complete genomeBaseplate J family protein6e-48191
NC_013315:1707293:1719681171968117207181038Clostridium difficile CD196 chromosome, complete genomephage tail protein4e-44178
NC_011837:3226500:3249882324988232509941113Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-44178
NC_009706:3291330:3318380331838033195071128Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein8e-44177
NC_010674:1986000:1992898199289819939651068Clostridium botulinum B str. Eklund 17B, complete genomeputative conserved hypothetical protein1e-43177
NC_010001:3614314:3619140361914036202191080Clostridium phytofermentans ISDg, complete genomeBaseplate J family protein7e-43174
NC_014976:627935:6541406541406551861047Bacillus subtilis BSn5 chromosome, complete genomeputative phage capsid assembly protein1e-42174
NC_000964:1330000:1340663134066313417091047Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-41169
NC_014976:3546884:3555229355522935562751047Bacillus subtilis BSn5 chromosome, complete genomeputative base plate assembly protein; putative PBSX prophage protein5e-41168
NC_015913:117966:1492721492721503421071Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomebaseplate J family protein7e-41167
NC_019896:2719456:2727578272757827286241047Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completePhage-like element PBSX protein XkdT9e-41167
NC_020244:1335531:1344485134448513455311047Bacillus subtilis XF-1, complete genomehypothetical protein9e-41167
NC_016047:1435961:1447604144760414486501047Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein1e-40167
NC_014479:1291500:1299525129952513005711047Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative base plate assembly protein; PBSZ phage2e-40166
NC_017195:1308730:1318221131822113192671047Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein1e-39164
NC_016077:1944000:1965038196503819661051068Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein4e-39162
NC_009848:2755874:2758578275857827596271050Bacillus pumilus SAFR-032, complete genomebacteriophage baseplate assembly protein J9e-39160
NC_016047:261304:2689852689852700311047Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein1e-38160
NC_009012:2953638:2961599296159929626571059Clostridium thermocellum ATCC 27405, complete genomeBaseplate J-like protein6e-38158
NC_013406:6052913:6064990606499060661441155Paenibacillus sp. Y412MC10 chromosome, complete genomeBaseplate J family protein2e-36153
UCMB5137:861734:8783668783668794121047Bacillus atrophaeus UCMB-5137BATR1942_04035; putative phage capsid assembly protein; skin element; (location [796051:797098] strand +); from Bacillus atrophaeus 1942, complete gen2e-35150
NC_013517:1501276:1515672151567215167631092Sebaldella termitidis ATCC 33386, complete genomeUncharacterized phage Mu protein gp47-like protein7e-35148
NC_016641:2950000:2960522296052229616731152Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-34147
NC_014483:1179286:1191720119172011928711152Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein8e-34144
NC_020291:795500:8399728399728410601089Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomebaseplate J family protein4e-31135
NC_012491:3088500:3096595309659530976531059Brevibacillus brevis NBRC 100599, complete genomehypothetical protein5e-31135
NC_009617:3926843:3939480393948039405891110Clostridium beijerinckii NCIMB 8052 chromosome, complete genomebaseplate J family protein8e-30131
NC_016077:1388775:1398561139856113995801020Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein2e-28126
NC_012673:1:3613136131372791149Exiguobacterium sp. AT1b, complete genomeBaseplate J family protein9e-24111
NC_015737:143428:1544361544361555721137Clostridium sp. SY8519, complete genomephage Mu protein gp47-like protein2e-22106
NC_012563:1704345:1716862171686217179711110Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein7e-21101
NC_011837:1935294:1939120193912019402501131Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-20101
NC_009706:2003194:2007608200760820087381131Clostridium kluyveri DSM 555 chromosome, complete genomeXkdT-like protein1e-20101
NC_009706:1935418:1939244193924419403741131Clostridium kluyveri DSM 555 chromosome, complete genomeXkdT related phage protein1e-20101
NC_013216:4404085:4418636441863644197661131Desulfotomaculum acetoxidans DSM 771, complete genomeBaseplate J family protein1e-1894.7
NC_010674:2817651:2827773282777328288941122Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein2e-1893.2
NC_012563:2566500:2570289257028925714191131Clostridium botulinum A2 str. Kyoto, complete genomeputative baseplate J-like protein2e-1790.5
NC_009495:2479465:2482266248226624833961131Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein3e-1789.7
NC_009633:2592000:2597032259703225981681137Alkaliphilus metalliredigens QYMF chromosome, complete genomebaseplate J family protein8e-1478.2
NC_002937:255790:2580502580502591111062Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative3e-1272.8
NC_002937:2933000:2951774295177429528351062Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative4e-1272.8
NC_017297:2531750:253586525358652536092228Clostridium botulinum F str. 230613 chromosome, complete genome3e-1169.7
NC_002927:3827211:3837547383754738386171071Bordetella bronchiseptica RB50, complete genomeputative phage tail protein4e-1065.9
NC_000907:1568867:1589241158924115903081068Haemophilus influenzae Rd KW20, complete genomehypothetical protein7e-1065.1
NC_012559:1888000:189030918903091891148840Laribacter hongkongensis HLHK9, complete genomeProbable phage FluMu protein gp471e-0964.7
NC_011750:2928990:2940628294062829416861059Escherichia coli IAI39 chromosome, complete genomeputative baseplate J-like phage protein3e-0859.7
NC_014228:3282500:3311254331125433123271074Xenorhabdus nematophila ATCC 19061, complete genomeputative bacteriophage protein5e-0858.9
NC_009436:2776410:2790564279056427916221059Enterobacter sp. 638, complete genomebaseplate J family protein7e-0858.5
NC_008258:269806:2718452718452729031059Shigella flexneri 5 str. 8401, complete genomehypothetical protein9e-0858.2