Pre_GI: BLASTP Hits

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Query: NC_010723:371741:387743 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 387743, End: 388792, Length: 1050

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:370629:3923483923483933851038Clostridium botulinum B str. Eklund 17B, complete genomeABC transporter, substrate-binding protein9e-173606
NC_003909:4951444:4962650496265049636841035Bacillus cereus ATCC 10987, complete genomelipoprotein, putative4e-50198
NC_016779:4969626:4976725497672549777591035Bacillus cereus F837/76 chromosome, complete genomeABC transporter substrate-binding protein8e-50197
NC_016771:4962795:4971207497120749722411035Bacillus cereus NC7401, complete genomelipoprotein9e-50197
NC_011658:5007691:5018884501888450199181035Bacillus cereus AH187 chromosome, complete genomeputative lipoprotein9e-50197
NC_011969:4945441:4953853495385349548871035Bacillus cereus Q1 chromosome, complete genomelipoprotein7e-49194
NC_008600:5005345:5012457501245750134911035Bacillus thuringiensis str. Al Hakam, complete genomeABC transporter, substrate-binding protein6e-49194
NC_012472:5015621:5022733502273350237671035Bacillus cereus 03BB102, complete genomeputative lipoprotein6e-49194
NC_011725:5169135:5180391518039151814251035Bacillus cereus B4264 chromosome, complete genomelipoprotein2e-47190
NC_014171:5068500:5076053507605350770871035Bacillus thuringiensis BMB171 chromosome, complete genomeABC transporter substrate-binding protein2e-45183
NC_014364:1990000:2000764200076420018251062Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 12e-38160
NC_012563:1348500:1363689136368913647351047Clostridium botulinum A2 str. Kyoto, complete genomeABC transporter, substrate-binding protein1e-28127
NC_017179:3222015:3226058322605832271071050Clostridium difficile BI1, complete genomeABC transporter substrate-binding protein5e-28125
NC_013315:3214063:3218106321810632192271122Clostridium difficile CD196 chromosome, complete genomeABC transporter substrate-binding protein3e-28125
NC_012962:869295:8692958692958703261032Photorhabdus asymbiotica, complete genomeperiplasmic ferric iron-binding protein (putative periplasmic-iron binding protein)1e-27124
NC_017297:1280963:129455712945571295387831Clostridium botulinum F str. 230613 chromosome, complete genomeABC transporter substrate-binding protein4e-26119
NC_011313:871445:8886868886868897411056Aliivibrio salmonicida LFI1238 chromosome 2, complete sequenceextracellular solute-binding protein7e-24111
NC_014306:2476316:2497276249727624983041029Erwinia billingiae Eb661, complete genomeABC transporter, periplasmic substrate-binding protein8e-23108
NC_014122:967194:9842959842959853201026Methanocaldococcus infernus ME chromosome, complete genomeextracellular solute-binding protein family 13e-22106
NC_013446:4723380:4749627474962747506761050Comamonas testosteroni CNB-2, complete genomeperiplasmic iron binding protein3e-22106
NC_009718:1771500:178332717833271784127801Fervidobacterium nodosum Rt17-B1, complete genomeiron ABC transporter substrate-binding protein5e-22105
NC_013204:2371499:237930823793082380303996Eggerthella lenta DSM 2243, complete genomeABC-type transporter, periplasmic component7e-2098.2
NC_015376:965000:9682399682399692551017Burkholderia gladioli BSR3 chromosome chromosome 2, completeextracellular solute-binding family protein 154e-1995.9
NC_013204:2371499:237149923714992372389891Eggerthella lenta DSM 2243, complete genomeextracellular solute-binding protein family 15e-1995.5
NC_016783:201066:2235042235042245051002Corynebacterium diphtheriae INCA 402 chromosome, complete genomeABC transporter substrate-binding protein1e-1687.4
NC_016799:267310:2889952889952899961002Corynebacterium diphtheriae 31A chromosome, complete genomeABC transporter substrate-binding protein1e-1687.4
NC_016802:221343:2430142430142440151002Corynebacterium diphtheriae HC02 chromosome, complete genomeABC transporter substrate-binding protein9e-1684.7
NC_019940:1932906:195125019512501952245996Thioflavicoccus mobilis 8321 chromosome, complete genomeFe3+ ABC transporter substrate-binding protein2e-1583.6
NC_015683:241377:2606732606732616741002Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein4e-1479.3
NC_009012:1901492:1919023191902319201291107Clostridium thermocellum ATCC 27405, complete genomeextracellular solute-binding protein, family 16e-1375.5
NC_016932:175872:191788191788192777990Corynebacterium pseudotuberculosis 316 chromosome, complete genomeSpermidine/putrescine-binding periplasmic protein2e-1273.6
NC_014121:3235911:3241377324137732423931017Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeiron(III) ABC transporter, periplasmic iron(III)-binding protein4e-1272.8
NC_015572:4576778:458515145851514586149999Methylomonas methanica MC09 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-1272.4
NC_006177:2943259:2964845296484529659421098Symbiobacterium thermophilum IAM 14863, complete genomeiron ABC transporter substrate-binding protein1e-1170.9
NC_012917:3241196:3291769329176932927851017Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeextracellular solute-binding protein family 13e-1066.2
NC_013172:542896:5511245511245522031080Brachybacterium faecium DSM 4810, complete genomeABC-type Fe3+ transport system, periplasmic component5e-1065.9
NC_006177:1254635:1276505127650512775751071Symbiobacterium thermophilum IAM 14863, complete genomeABC transporter substrate-binding protein1e-0964.3
NC_012225:1015452:1023891102389110249101020Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitC6e-0962
NC_015680:930483:9469259469259479681044Pyrococcus yayanosii CH1 chromosome, complete genomethiamine-binding periplasmic protein1e-0861.2
NC_009921:6421387:6437373643737364384491077Frankia sp. EAN1pec, complete genomeextracellular solute-binding protein family 12e-0860.8
NC_012225:1015452:102177610217761022747972Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitA4e-0859.3
NC_012225:1015452:1022782102278210238101029Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitB5e-0858.9
NC_011000:1216430:1220139122013912211671029Burkholderia cenocepacia J2315 chromosome 1, complete sequenceextracellular solute-binding protein5e-0755.8
NC_014364:1990000:199138319913831992369987Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeLysR substrate-binding protein5e-0755.8
NC_008262:67711:8062880628816921065Clostridium perfringens SM101, complete genomeBacterial extracellular solute-binding protein domain protein5e-0755.8
NC_015381:1318818:1321712132171213227671056Burkholderia gladioli BSR3 chromosome 1, complete sequenceextracellular solute-binding protein7e-0755.1
NC_012880:3748665:378308237830823784059978Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 19e-0754.7
NC_015063:1:55055016561107Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequencehypothetical protein2e-0653.5
NC_015063:122000:55055016561107Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequencehypothetical protein2e-0653.5
NC_007948:4558000:4592642459264245937211080Polaromonas sp. JS666, complete genomeputative ABC transport system, substrate-binding exported protein2e-0653.5
NC_018681:6977670:6992751699275169938241074Nocardia brasiliensis ATCC 700358 chromosome, complete genome2-aminoethylphosphonate ABC transporter substrate-binding protein3e-0653.1
NC_012225:1015452:102063010206301021604975Brachyspira hyodysenteriae WA1, complete genomeperiplasmic-iron-binding protein BitB7e-0652