Pre_GI: BLASTP Hits

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Query: NC_010723:3530000:3537460 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 3537460, End: 3538140, Length: 681

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:3674739:368027836802783680958681Clostridium botulinum B str. Eklund 17B, complete genomeintegral membrane protein2e-95348
NC_013199:811929:812706812706813338633Lactobacillus rhamnosus Lc 705, complete genomeconserved hypothetical protein (integral membrane protein by homology)2e-2099.4
NC_013198:813830:818158818158818790633Lactobacillus rhamnosus GG, complete genomeconserved hypothetical protein (integral membrane protein by homology)4e-2098.2
NC_014334:769205:770640770640771263624Lactobacillus casei str. Zhang chromosome, complete genomehypothetical protein7e-2097.4
NC_010999:880878:881660881660882283624Lactobacillus casei, complete genomePutative uncharacterized protein ylfI1e-1996.7
NC_008526:817628:819063819063819686624Lactobacillus casei ATCC 334, complete genomePredicted membrane protein1e-1996.7
NC_007530:1459412:146091814609181461604687Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein2e-1995.9
NC_005945:1459357:146087214608721461558687Bacillus anthracis str. Sterne, complete genomehypothetical protein2e-1995.9
NC_014393:3650957:365335536533553653984630Clostridium cellulovorans 743B chromosome, complete genomeintegral membrane protein TIGR019063e-1995.5
NC_008262:2498000:250201825020182502668651Clostridium perfringens SM101, complete genomeintegral membrane protein1e-1893.2
NC_008525:1202852:121695612169561217582627Pediococcus pentosaceus ATCC 25745, complete genomePredicted membrane protein9e-1890.5
NC_004557:2552418:255468325546832555321639Clostridium tetani E88, complete genomemembrane spanning protein1e-1686.3
NC_007929:473500:477044477044477688645Lactobacillus salivarius subsp. salivarius UCC118, complete genomeHypothetical membrane spanning protein2e-1685.9
NC_016605:766836:771932771932772564633Pediococcus claussenii ATCC BAA-344 chromosome, complete genomehypothetical protein6e-1684.3
NC_007576:435713:441074441074441715642Lactobacillus sakei subsp. sakei 23K, complete genomeHypothetical integral membrane protein2e-1582.4
NC_015975:1493636:151386915138691514495627Lactobacillus ruminis ATCC 27782 chromosome, complete genomeintergral membrane protein7e-1580.9
NC_009697:3463736:348629534862953486939645Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein1e-1480.1
NC_009495:3502000:351030735103073510951645Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein1e-1480.1
NC_012563:3729817:375238137523813753025645Clostridium botulinum A2 str. Kyoto, complete genomeintegral membrane protein TIGR019061e-1480.1
NC_010080:445398:448172448172448780609Lactobacillus helveticus DPC 4571, complete genomeputative membrane protein2e-1479.7
NC_017297:3594000:360255736025573603201645Clostridium botulinum F str. 230613 chromosome, complete genomeintegral membrane protein2e-1479.3
NC_009699:3581376:360394136039413604585645Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein2e-1479.3
NC_018528:446610:452265452265452873609Lactobacillus helveticus R0052 chromosome, complete genomeMembrane protein3e-1479
NC_015602:117939:122497122497123105609Lactobacillus kefiranofaciens ZW3 chromosome, complete genomehypothetical protein4e-1478.2
NC_008530:469802:474323474323474940618Lactobacillus gasseri ATCC 33323, complete genomePredicted membrane protein6e-1477.8
NC_010520:3580000:358817935881793588823645Clostridium botulinum A3 str. Loch Maree, complete genomeintegral membrane protein TIGR019067e-1477.4
NC_006814:403723:411003411003411611609Lactobacillus acidophilus NCFM, complete genomehypothetical protein2e-1376.3
NC_011134:1222739:123839712383971239044648Streptococcus equi subsp. zooepidemicus str. MGCS10565, completehypothetical membrane spanning protein4e-1375.1
NC_015214:437733:444612444612445220609Lactobacillus acidophilus 30SC chromosome, complete genomehypothetical protein7e-1374.3
NC_014106:419511:425106425106425714609Lactobacillus crispatus ST1, complete genomeMembrane protein6e-1374.3
NC_012470:853561:856218856218856859642Streptococcus equi subsp. zooepidemicus, complete genomemembrane protein5e-1374.3
NC_013504:447891:452403452403453020618Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein1e-1273.6
NC_014724:439594:447340447340447948609Lactobacillus amylovorus GRL 1112 chromosome, complete genomehypothetical protein1e-1273.6
NC_005362:550823:555344555344555952609Lactobacillus johnsonii NCC 533, complete genomehypothetical protein1e-1273.6
NC_021182:1473535:148854114885411489209669Clostridium pasteurianum BC1, complete genomeintegral membrane protein TIGR019066e-1270.9
NC_014727:1537183:155327615532761553881606Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,membrane protein2e-1169.3
NC_015697:1814128:181948918194891820142654Lactobacillus reuteri SD2112 chromosome, complete genomeintegral membrane protein3e-1065.5
NC_012004:1053682:105693610569361057559624Streptococcus uberis 0140J, complete genomemembrane protein4e-1065.1
NC_009513:618000:622461622461623114654Lactobacillus reuteri F275, complete genomeintegral membrane protein TIGR019067e-1063.9