Pre_GI: BLASTP Hits

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Query: NC_010723:3530000:3536627 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 3536627, End: 3537376, Length: 750

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:3674739:367944636794463680195750Clostridium botulinum B str. Eklund 17B, complete genometransporter2e-111401
NC_019908:852230:869858869858870625768Brachyspira pilosicoli P43/6/78 chromosome, complete genometransporter membrane1e-32140
NC_014330:2409559:240955924095592410326768Brachyspira pilosicoli 95/1000 chromosome, complete genometransporter membrane1e-32139
NC_015437:697051:697051697051697809759Selenomonas sputigena ATCC 35185 chromosome, complete genomeprotein of unknown function DUF813e-27122
NC_015276:1037862:104442710444271045206780Marinomonas mediterranea MMB-1 chromosome, complete genomeprotein of unknown function DUF813e-27122
NC_017068:130226:132382132382133146765Selenomonas ruminantium subsp. lactilytica TAM6421, completemembrane protein1e-25117
NC_013416:1526920:153955315395531540320768Aggregatibacter actinomycetemcomitans D11S-1, complete genomeinner membrane protein YfcA2e-25116
NC_016513:1859767:187470318747031875470768Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeinner membrane protein YfcA2e-25116
NC_013959:1555799:157281115728111573578768Sideroxydans lithotrophicus ES-1 chromosome, complete genomeprotein of unknown function DUF815e-23108
NC_017200:345502:351091351091351861771Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein7e-23107
NC_016779:312500:318945318945319715771Bacillus cereus F837/76 chromosome, complete genomehypothetical protein1e-22106
NC_007164:622000:652500652500653294795Corynebacterium jeikeium K411, complete genomehypothetical protein2e-22106
NC_015733:3736104:373949737394973740327831Pseudomonas putida S16 chromosome, complete genomehypothetical protein6e-22104
NC_012125:1360593:138650113865011387310810Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-22104
NC_012668:1623350:165034316503431651119777Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-21103
NC_008027:2331617:235545623554562356217762Pseudomonas entomophila L48, complete genomehypothetical protein2e-21102
NC_014210:2638773:263961626396162640383768Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF818e-21100
NC_012779:2619871:262328626232862624086801Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-20100
NC_014012:3356629:337150033715003372273774Shewanella violacea DSS12, complete genomehypothetical protein8e-2097.4
NC_003919:5056650:508042750804275081206780Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein3e-1995.9
NC_010572:5445081:546529154652915466085795Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein5e-1994.7
NC_008322:2983951:300111730011173001890774Shewanella sp. MR-7, complete genomeprotein of unknown function DUF818e-1994
NC_008577:3125675:314095731409573141730774Shewanella sp. ANA-3 chromosome 1, complete sequenceprotein of unknown function DUF811e-1893.6
NC_010644:231486:234531234531235283753Elusimicrobium minutum Pei191, complete genomehypothetical protein1e-1893.2
NC_008321:2922000:294043429404342941207774Shewanella sp. MR-4, complete genomeprotein of unknown function DUF814e-1892
NC_010172:4185904:419190041919004192691792Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF816e-1891.3
NC_012988:4633930:463860746386074639398792Methylobacterium extorquens DM4, complete genomehypothetical protein6e-1891.3
NC_012808:4235567:424024642402464241037792Methylobacterium extorquens AM1, complete genomehypothetical protein8e-1890.9
NC_011757:4293000:429544942954494296240792Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF819e-1890.5
NC_015556:2265940:227547522754752276242768Pseudomonas fulva 12-X chromosome, complete genomeprotein of unknown function DUF811e-1790.1
NC_002505:2537655:254839525483952549180786Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein1e-1790.1
NC_009457:2095366:210162721016272102412786Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-1790.1
NC_012578:2479150:248541124854112486196786Vibrio cholerae M66-2 chromosome I, complete sequenceputative Inner membrane protein1e-1790.1
NC_012582:2626786:263304726330472633832786Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative Inner membrane protein1e-1790.1
NC_012668:1036000:104548610454861046271786Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-1790.1
NC_016445:2012294:201855220185522019337786Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-1790.1
NC_016944:2588435:259469325946932595478786Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-1790.1
NC_015379:4630367:463117146311714631935765Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein, putative membrane protein1e-1790.1
NC_009092:2902171:292448029244802925253774Shewanella loihica PV-4, complete genomeprotein of unknown function DUF812e-1789.4
NC_014391:3596812:361355136135513614270720Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein7e-1787.8
NC_014815:5603000:561002456100245610743720Micromonospora sp. L5 chromosome, complete genomehypothetical protein8e-1787.4
NC_011663:3181579:320260832026083203381774Shewanella baltica OS223 chromosome, complete genomehypothetical protein8e-1787.4
NC_013421:1143500:115253411525341153298765Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF811e-1686.7
NC_014618:1452927:147452414745241475333810Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein2e-1686.3
NC_004547:1062410:106241010624101063174765Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein4e-1581.6
NC_015677:285896:302473302473303231759Ramlibacter tataouinensis TTB310 chromosome, complete genomemembrane protein7e-1580.9
NC_020209:945000:952807952807953370564Pseudomonas poae RE*1-1-14, complete genomehypothetical protein8e-1477.4
NC_011899:948790:964423964423965166744Halothermothrix orenii H 168, complete genomepredicted permease1e-1376.6
NC_015434:3581001:359625935962593597038780Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein2e-1272.4
NC_009718:643200:668532668532669269738Fervidobacterium nodosum Rt17-B1, complete genomehypothetical protein6e-1064.7