Pre_GI: BLASTP Hits

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Query: NC_010723:2269372:2280588 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 2280588, End: 2281379, Length: 792

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009253:2819000:282951828295182830294777Desulfotomaculum reducens MI-1 chromosome, complete genomepeptidase S14, ClpP1e-63243
NC_021182:338428:343745343745344485741Clostridium pasteurianum BC1, complete genomeprotease subunit of ATP-dependent protease1e-38159
NC_010674:2328307:234404323440432344786744Clostridium botulinum B str. Eklund 17B, complete genomepeptidase S14, ClpP9e-36150
NC_010516:2676746:269248926924892693247759Clostridium botulinum B1 str. Okra, complete genomeputative Clp protease2e-35149
NC_009697:2558286:257396925739692574727759Clostridium botulinum A str. ATCC 19397 chromosome, completeClp protease3e-35148
NC_011658:2080390:207963820796382080393756Bacillus cereus AH187 chromosome, complete genomeprophage LambdaBa02, Clp protease family protein6e-31134
NC_016771:2039195:203847620384762039198723Bacillus cereus NC7401, complete genomeprophage LambdaBa02, Clp protease family protein6e-31134
NC_006322:1507411:151962215196221520368747Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-30133
NC_006270:1511000:151876115187611519507747Bacillus licheniformis ATCC 14580, complete genomeATP-dependent Clp protease proteolytic subunit (class III heat-shock protein)2e-30133
NC_007929:785875:809102809102809851750Lactobacillus salivarius subsp. salivarius UCC118, complete genomeATP-dependent Clp protease proteolytic subunit1e-30133
NC_017190:852171:870633870633871355723Bacillus amyloliquefaciens LL3 chromosome, complete genomeATP-dependent Clp protease proteolytic subunit Endopeptidase Clp1e-30133
NC_017190:871352:870633870633871355723Bacillus amyloliquefaciens LL3 chromosome, complete genomeATP-dependent Clp protease proteolytic subunit Endopeptidase Clp1e-30133
NC_014551:865254:886558886558887280723Bacillus amyloliquefaciens DSM 7, complete genomeATP-dependent Clp protease proteolytic subunit Endopeptidase Clp3e-30132
NC_007530:3749645:376754637675463768301756Bacillus anthracis str. 'Ames Ancestor', complete genomeprophage lambdaba02, clp protease family protein6e-30131
NC_012581:466798:470549470549471271723Bacillus anthracis str. CDC 684 chromosome, complete genomeprophage LambdaBa02, Clp protease family protein6e-30131
NC_014727:1220869:124163312416331242367735Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,ATP-dependent clp protease proteolytic subunit8e-29127
NC_017295:2022085:203970420397042040474771Clostridium acetobutylicum EA 2018 chromosome, complete genomeClpP family serine1e-28126
NC_003030:2023751:204029720402972041067771Clostridium acetobutylicum ATCC 824, complete genomeClpP family serine protease, possible phage related1e-28126
NC_015687:2025345:204189120418912042661771Clostridium acetobutylicum DSM 1731 chromosome, complete genomeClpP family serine protease1e-28126
NC_006270:3418097:344897734489773449708732Bacillus licheniformis ATCC 14580, complete genomeATP-dependent protease proteolytic subunit (class III heat-shock protein)1e-27123
NC_006322:3418268:344914834491483449879732Bacillus licheniformis ATCC 14580, complete genomeClpP1e-27123
NC_014376:787460:821926821926822684759Clostridium saccharolyticum WM1 chromosome, complete genomepeptidase S14 ClpP2e-27122
NC_014328:303063:368721368721369560840Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephage related protease8e-27120
NC_015519:2489728:251826325182632518952690Tepidanaerobacter sp. Re1 chromosome, complete genomepeptidase S14 ClpP2e-26119
NC_017337:321155:345806345806346579774Staphylococcus aureus subsp. aureus ED133 chromosome, completeProphage Clp protease-like protein7e-26117
NC_003923:1533500:155128515512851552058774Staphylococcus aureus subsp. aureus MW2, complete genomeprotease2e-25116
NC_002951:351029:377145377145377918774Staphylococcus aureus subsp. aureus COL, complete genomeprophage L54a, Clp protease, putative2e-25116
NC_010079:1564327:158202115820211582794774Staphylococcus aureus subsp. aureus USA300_TCH1516, completebacteriophage protease2e-25116
NC_007795:1466318:148401214840121484785774Staphylococcus aureus subsp. aureus NCTC 8325, complete genomescaffolding protease2e-25116
NC_002953:998944:100486110048611005634774Staphylococcus aureus subsp. aureus MSSA476, complete genomephage protease2e-25116
NC_017338:1517723:153541615354161536189774Staphylococcus aureus subsp. aureus JKD6159 chromosome, completecaseinolytic phage protease2e-25116
NC_017342:1765132:177076117707611771534774Staphylococcus aureus subsp. aureus TCH60 chromosome, completebacteriophage protease2e-25116
NC_009487:1097500:110071811007181101491774Staphylococcus aureus subsp. aureus JH9 chromosome, completepeptidase S14, ClpP2e-25116
NC_009632:1097379:110059211005921101365774Staphylococcus aureus subsp. aureus JH1 chromosome, completepeptidase S14 ClpP2e-25116
NC_002952:1592000:161195616119561612729774Staphylococcus aureus subsp. aureus MRSA252, complete genomephage protease2e-25116
NC_020164:1677452:169356516935651694338774Staphylococcus warneri SG1, complete genomeProphage Clp protease-like protein1e-25116
NC_017351:1564469:158124815812481582021774Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeclp protease family protein2e-25115
NC_013450:2047000:206475020647502065523774Staphylococcus aureus subsp. aureus ED98, complete genomephage Clp protease2e-25115
NC_009697:3110772:312341331234133124156744Clostridium botulinum A str. ATCC 19397 chromosome, completeClp protease5e-22105
NC_016791:1341858:134952213495221350256735Clostridium sp. BNL1100 chromosome, complete genomeprotease subunit of ATP-dependent protease8e-21100
NC_014915:2963500:298575929857592986493735Geobacillus sp. Y412MC52 chromosome, complete genomepeptidase S14 ClpP3e-2099
NC_013411:597235:617442617442618176735Geobacillus sp. Y412MC61, complete genomepeptidase S14 ClpP3e-2099
AP010958:1472506:1472506147250614745302025Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative protease/scaffold protein3e-2099
NC_013353:1472506:1472506147250614745302025Escherichia coli O103:H2 str. 12009, complete genomeprotease/scaffold protein3e-2099
NC_013960:979556:9873029873029896592358Nitrosococcus halophilus Nc4 chromosome, complete genomepeptidase S14 ClpP3e-2099
NC_013364:3339768:3341215334121533432392025Escherichia coli O111:H- str. 11128, complete genomeputative protease/scaffold protein3e-2099
NC_002695:2893951:2913472291347229145781107Escherichia coli O157:H7 str. Sakai, complete genomeputative protease/scaffold protein5e-2098.2
NC_014632:1112733:1131845113184511329271083Ilyobacter polytropus DSM 2926 chromosome, complete genomepeptidase S14 ClpP7e-2097.8
CU928145:1773642:1774052177405217762712220Escherichia coli 55989 chromosome, complete genomeputative ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)2e-1996.7
NC_011748:1773642:1774052177405217762712220Escherichia coli 55989, complete genomeputative ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)2e-1996.7
NC_011740:4520373:4536005453600545382242220Escherichia fergusonii ATCC 35469, complete genomeputative ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)1e-1996.7
NC_016612:3314846:3343862334386233458081947Klebsiella oxytoca KCTC 1686 chromosome, complete genomepeptidase S14 ClpP2e-1996.3
NC_011660:2541632:255993125599312560761831Listeria monocytogenes HCC23 chromosome, complete genomeserine protease5e-1994.7
NC_011353:2892265:2906593290659329100633471Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage portal protein, lambda family7e-1994.4
NC_013008:1761165:1762681176268117646361956Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeprotease7e-1994.4
NC_011353:1761977:1763705176370517656601956Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeClp protease domain-containing protein7e-1994.4
NC_013361:2138716:2138716213871621407432028Escherichia coli O26:H11 str. 11368 chromosome, complete genomeprotease/scaffold protein1e-1894
NC_011742:4962008:4978537497853749807562220Escherichia coli S88 chromosome, complete genomeATP-dependent Clp protease proteolytic subunit1e-1893.6
NC_008563:5011997:5028569502856950307462178Escherichia coli APEC O1, complete genomeputative protease/scaffold protein1e-1893.6
NC_011751:1859606:1859606185960618617262121Escherichia coli UMN026 chromosome, complete genomeputative ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)1e-1893.6
NC_012724:3100430:3100430310043031015301101Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein2e-1893.2
NC_015497:2997275:300977930097793010504726Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomepeptidase S14 ClpP4e-1892
NC_017047:1906000:1924978192497819269361959Rahnella aquatilis HX2 chromosome, complete genomepeptidase S14 ClpP2e-1789.7
NC_017060:59500:8480384803867611959Rahnella aquatilis HX2 plasmid PRA1, complete sequencepeptidase S14 ClpP2e-1789.4
NC_009699:3429817:344573534457353446535801Clostridium botulinum F str. Langeland chromosome, complete genomeClp protease1e-1687
NC_017297:3428429:344434834443483445148801Clostridium botulinum F str. 230613 chromosome, complete genomeputative Clp protease1e-1687
NC_014121:1682638:1712523171252317144391917Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeATP-dependent protease2e-1686.7
NC_014376:1879000:188187818818781882588711Clostridium saccharolyticum WM1 chromosome, complete genomepeptidase S14 ClpP2e-1685.9
NC_012563:2925472:294247729424772943202726Clostridium botulinum A2 str. Kyoto, complete genomeClp protease6e-1684.7
NC_009053:553298:5795015795015815252025Actinobacillus pleuropneumoniae L20, complete genomeputative Clp-like protease7e-1684.3
NC_012563:2101449:211810221181022118845744Clostridium botulinum A2 str. Kyoto, complete genomeserine protease1e-1584
NC_011770:2690501:271865227186522719542891Pseudomonas aeruginosa LESB58, complete genomeClpP protease1e-1584
NC_009699:2017329:202943520294352030178744Clostridium botulinum F str. Langeland chromosome, complete genomeClp protease1e-1583.6
NC_017297:2017000:202954120295412030284744Clostridium botulinum F str. 230613 chromosome, complete genomeputative Clp protease1e-1583.6
NC_011899:355638:364810364810365514705Halothermothrix orenii H 168, complete genomepeptidase S14 ClpP2e-1583.2
NC_010501:4787963:4796418479641847982801863Pseudomonas putida W619, complete genomepeptidase S14 ClpP2e-1582.8
NC_011772:3749399:376278737627873763530744Bacillus cereus G9842, complete genomeClp protease1e-1480.5
NC_012563:1704345:170558817055881706349762Clostridium botulinum A2 str. Kyoto, complete genomeserine protease3e-1479
NC_011898:3367457:338912533891253389814690Clostridium cellulolyticum H10, complete genomepeptidase S14 ClpP4e-1478.6
NC_011094:638552:6715086715086735772070Salmonella enterica subsp. enterica serovar Schwarzengrund strATP-dependent protease6e-1478.2
NC_010184:3631891:364992236499223650665744Bacillus weihenstephanensis KBAB4, complete genomepeptidase S14 ClpP6e-1478.2
NC_009706:2673906:271532327153232716012690Clostridium kluyveri DSM 555 chromosome, complete genomePhage-related protease6e-1478.2
NC_016831:1734292:1734292173429217363462055Salmonella enterica subsp. enterica serovar Gallinarum/pullorumATP Dependent clp Protease7e-1477.8
NC_011205:1345511:1377272137727213793262055Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ATP-dependent protease7e-1477.8
NC_007432:654904:683482683482684180699Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, ClpP endopeptidase (S14) family, non-peptidase homologue, putative8e-1477.8
NC_016830:5031819:5031819503181950329791161Pseudomonas fluorescens F113 chromosome, complete genomeprophage Clp protease-like protein1e-1377
NC_008702:2039462:2050956205095620528331878Azoarcus sp. BH72, complete genomeEndopeptidase Clp1e-1377
NC_017068:1216548:121772912177291218439711Selenomonas ruminantium subsp. lactilytica TAM6421, completeATP-dependent Clp protease proteolytic subunit1e-1377
NC_011770:1456667:1458363145836314604442082Pseudomonas aeruginosa LESB58, complete genomePutative Clp protease2e-1376.6
NC_004129:2201780:2223871222387122250131143Pseudomonas fluorescens Pf-5, complete genomeATP-dependent Clp protease, proteolytic subunit ClpP4e-1375.5
NC_014121:1682638:170498417049841705502519Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-1272
NC_013892:2005480:201518220151822016033852Xenorhabdus bovienii SS-2004 chromosome, complete genomeClpP protease9e-1270.9
NC_012559:1685812:168771216877121688470759Laribacter hongkongensis HLHK9, complete genomeATP-dependent Clp protease proteolytic subunit2e-1169.7
NC_010002:3753000:3768837376883737698741038Delftia acidovorans SPH-1, complete genomepeptidase S14 ClpP5e-1168.2
NC_014640:4293430:431880243188024319641840Achromobacter xylosoxidans A8 chromosome, complete genomeClp protease family protein5e-1168.2
NC_015873:1193843:1231635123163512327051071Megasphaera elsdenii DSM 20460, complete genomeputative ATP-dependent Clp protease1e-0963.9
NC_015683:1296000:1298969129896913003631395Corynebacterium ulcerans BR-AD22 chromosome, complete genomeATP-dependent Clp protease proteolytic subunit 21e-0963.5
NC_017317:1291294:1295338129533812967321395Corynebacterium ulcerans 809 chromosome, complete genomeATP-dependent Clp protease proteolytic subunit 21e-0963.5
NC_018704:176088:208682208682209404723Amphibacillus xylanus NBRC 15112, complete genomepeptidase S14 family protein2e-0963.2
NC_016894:3988180:399008839900883990861774Acetobacterium woodii DSM 1030 chromosome, complete genomeATP-dependent Clp protease proteolytic subunit3e-0962.8
NC_016894:3580274:358379835837983584571774Acetobacterium woodii DSM 1030 chromosome, complete genomeputative Clp protease, phage associated3e-0962.8
NC_007650:1192310:122086712208671221709843Burkholderia thailandensis E264 chromosome II, complete sequenceClpP protease5e-0961.6
NC_015914:279413:2862172862172874581242Cyclobacterium marinum DSM 745 chromosome, complete genomepeptidase S14 ClpP5e-0961.6
NC_010086:810890:833607833607834449843Burkholderia multivorans ATCC 17616 chromosome 2, completepeptidase S14 ClpP7e-0961.2
NC_014538:1598106:161957416195741620254681Thermoanaerobacter sp. X513 chromosome, complete genomepeptidase S14 ClpP8e-0960.8
NC_010320:1268355:129412712941271294807681Thermoanaerobacter sp. X514 chromosome, complete genomepeptidase S14, ClpP8e-0960.8
NC_002927:1787633:178763317876331788508876Bordetella bronchiseptica RB50, complete genomephage-related Clp protease1e-0860.5
NC_015520:2974048:298342329834232984148726Mahella australiensis 50-1 BON chromosome, complete genomepeptidase S14 ClpP5e-0858.2
NC_018870:2316499:234603223460322346757726Thermacetogenium phaeum DSM 12270 chromosome, complete genomepeptidase S14 ClpP6e-0858.2
NC_016627:4323370:434598243459824346710729Clostridium clariflavum DSM 19732 chromosome, complete genomeprotease subunit of ATP-dependent protease6e-0858.2
NC_009012:1934107:195594319559431956671729Clostridium thermocellum ATCC 27405, complete genomepeptidase S14, ClpP6e-0858.2
NC_014410:800500:817289817289818017729Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,peptidase S14 ClpP6e-0858.2
NC_020291:1122282:112934111293411130105765Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage protein1e-0757.4
NC_014364:2111685:214083921408392141672834Spirochaeta smaragdinae DSM 11293 chromosome, complete genomepeptidase S14 ClpP1e-0757
NC_010520:1614333:164100016410001641563564Clostridium botulinum A3 str. Loch Maree, complete genomeprophage LambdaBa02, Clp protease family protein1e-0757
NC_006371:1411335:143175614317561432568813Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical ClpP family serine protease, possible phage related2e-0756.6
NC_011891:1437335:145335814533581454140783Anaeromyxobacter dehalogenans 2CP-1, complete genomepeptidase S14 ClpP2e-0756.6
NC_016633:3069518:309172630917263092454729Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeprotease subunit of ATP-dependent protease3e-0755.8
NC_021184:4493440:449750244975024498215714Desulfotomaculum gibsoniae DSM 7213, complete genomeprotease subunit of ATP-dependent protease3e-0755.8
NC_010645:1523867:154730915473091547962654Bordetella avium 197N, complete genomeATP-dependent Clp protease proteolytic subunit5e-0755.1
NC_014393:4775452:480123748012374802010774Clostridium cellulovorans 743B chromosome, complete genomepeptidase S14 ClpP5e-0755.1
NC_009633:4097536:411910941191094119807699Alkaliphilus metalliredigens QYMF chromosome, complete genomepeptidase S14, ClpP6e-0754.7
NC_007929:293709:312463312463313182720Lactobacillus salivarius subsp. salivarius UCC118, complete genomeATP-dependent Clp protease proteolytic subunit8e-0754.3
NC_015428:1544728:157083615708361571537702Lactobacillus buchneri NRRL B-30929 chromosome, complete genomepeptidase S14 ClpP7e-0754.3
NC_011740:2769961:2767926276792627701992274Escherichia fergusonii ATCC 35469, complete genomeputative ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) of prophage2e-0653.5
NC_016941:1979411:198987819898781990600723Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative Clp protease2e-0653.1
NC_004070:747146:768690768690769496807Streptococcus pyogenes MGAS315, complete genomehypothetical protein4e-0652
NC_004606:1107500:112726011272601128066807Streptococcus pyogenes SSI-1, complete genomeputative scaffolding protein4e-0652
NC_003485:296140:313871313871314677807Streptococcus pyogenes MGAS8232, complete genomehypothetical protein4e-0652
NC_007761:3047321:3058900305890030609842085Rhizobium etli CFN 42, complete genomeprobable Clp protease protein6e-0651.6