Pre_GI: BLASTP Hits

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Query: NC_010723:2231834:2242870 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 2242870, End: 2243277, Length: 408

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015391:2059191:206485920648592065281423Carnobacterium sp. 17-4 chromosome, complete genomehypothetical protein7e-39159
NC_017295:1036348:103851310385131038911399Clostridium acetobutylicum EA 2018 chromosome, complete genomehypothetical protein4e-38156
NC_015687:1037706:103888610388861039284399Clostridium acetobutylicum DSM 1731 chromosome, complete genomehypothetical protein4e-38156
NC_003030:1037885:103906510390651039463399Clostridium acetobutylicum ATCC 824, complete genomehypothetical protein4e-38156
NC_015732:773143:787528787528787920393Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein1e-34144
NC_014122:726070:741018741018741416399Methanocaldococcus infernus ME chromosome, complete genomeprotein of unknown function UPF00472e-34144
NC_003869:2099000:209907620990762099483408Thermoanaerobacter tengcongensis MB4, complete genomehypothetical protein7e-34142
NC_011899:86800:883788837888776399Halothermothrix orenii H 168, complete genomehypothetical protein4e-31133
NC_010730:813534:816106816106816504399Sulfurihydrogenibium sp. YO3AOP1, complete genomeprotein of unknown function UPF00471e-30132
NC_007796:1731500:175739217573921757793402Methanospirillum hungatei JF-1, complete genomeprotein of unknown function UPF00471e-30131
NC_015565:2827444:284671628467162847180465Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein3e-29127
NC_014377:669216:673432673432673842411Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein of unknown function UPF00477e-28122
NC_014654:2138794:215204221520422152443402Halanaerobium sp. 'sapolanicus' chromosome, complete genomeprotein of unknown function UPF00472e-27121
NC_011126:922182:936040936040936441402Hydrogenobaculum sp. Y04AAS1, complete genomeprotein of unknown function UPF00473e-27120
NC_015587:905255:921205921205921606402Hydrogenobaculum sp. SHO chromosome, complete genomeprotein of unknown function UPF00471e-26118
NC_020411:905335:921285921285921686402Hydrogenobaculum sp. HO, complete genomesecondary thiamine-phosphate synthase enzyme1e-26118
NC_015557:905145:921095921095921496402Hydrogenobaculum sp. 3684 chromosome, complete genomeprotein of unknown function UPF00471e-26118
NC_017080:1194199:120858712085871209009423Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein1e-24111
NC_015499:309394:323585323585323986402Thermodesulfobium narugense DSM 14796 chromosome, complete genomeprotein of unknown function UPF00473e-21100
NC_008818:1127575:113772611377261138136411Hyperthermus butylicus DSM 5456, complete genomeuniversally conserved protein3e-1994
NC_015435:120334:123036123036123440405Metallosphaera cuprina Ar-4 chromosome, complete genomehypothetical protein7e-1992.4
NC_015680:369777:369777369777370178402Pyrococcus yayanosii CH1 chromosome, complete genomehypothetical protein1e-1891.7
NC_007181:55685:607976079761201405Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein7e-1889.4
NC_014216:1197704:122457212245721224988417Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeprotein of unknown function UPF00475e-1682.8
NC_003106:2060628:207643220764322076836405Sulfolobus tokodaii str. 7, complete genomehypothetical protein5e-1682.8
NC_014374:1072218:114161311416131142023411Acidilobus saccharovorans 345-15 chromosome, complete genomehypothetical protein8e-1682.4
NC_012726:287637:307260307260307673414Sulfolobus islandicus M.16.4 chromosome, complete genomehypothetical protein9e-1682
NC_011978:1812000:181767918176791818098420Thermotoga neapolitana DSM 4359, complete genomehypothetical protein2e-1580.9
NC_013967:1967896:196938119693811969806426Haloferax volcanii DS2 chromosome, complete genomeconserved hypothetical protein TIGR001491e-1478.6
NC_013642:505518:520772520772521191420Thermotoga naphthophila RKU-10, complete genomeprotein of unknown function UPF00472e-1477.8
NC_009078:74954:957469574696165420Burkholderia pseudomallei 1106a chromosome II, complete sequencehypothetical protein3e-1477.4
NC_007435:1914375:193482419348241935243420Burkholderia pseudomallei 1710b chromosome II, complete sequenceconserved hypothetical protein TIGR001493e-1477.4
NC_009075:92210:115628115628116047420Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein3e-1477.4
NC_006351:73000:963029630296721420Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein3e-1477.4
NC_014964:923681:943156943156943572417Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein2e-1477.4
NC_014538:1075720:107946510794651079881417Thermoanaerobacter sp. X513 chromosome, complete genomehypothetical protein2e-1477.4
NC_010320:1860801:187446318744631874879417Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein2e-1477.4
NC_010321:947233:950963950963951379417Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein2e-1477.4
NC_013061:2775623:279673527967352797157423Pedobacter heparinus DSM 2366, complete genomeprotein of unknown function UPF00472e-1477.4
NC_018012:2159814:217268221726822173110429Thiocystis violascens DSM 198 chromosome, complete genomesecondary thiamine-phosphate synthase enzyme7e-1475.9
NC_014209:1392115:140950714095071409923417Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,protein of unknown function UPF00471e-1375.5
NC_014820:1057826:107650110765011076920420Cenarchaeum symbiosum A, complete genomehypothetical protein1e-1375.1
NC_015518:614806:629287629287629697411Acidianus hospitalis W1 chromosome, complete genomehypothetical protein2e-1374.7
NC_014836:1180454:119302711930271193443417Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein2e-1374.7
NC_020134:301500:314479314479314895417Clostridium stercorarium subsp. stercorarium DSM 8532, completehypothetical protein1e-1374.7
NC_015703:5649260:565141456514145651836423Runella slithyformis DSM 19594 chromosome, complete genomehypothetical protein2e-1374.3
NC_010552:196457:212027212027212446420Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceprotein of unknown function UPF00475e-1373.2
NC_015389:809474:839121839121839549429Coriobacterium glomerans PW2 chromosome, complete genomeprotein of unknown function UPF00475e-1373.2
NC_009831:2884851:290056229005622900981420Shewanella sediminis HAW-EB3, complete genomeprotein of unknown function UPF00477e-1372.8
NC_010628:675445:695746695746696183438Nostoc punctiforme PCC 73102, complete genomeprotein of unknown function UPF00476e-1372.8
NC_014472:294775:312976312976313398423Flavobacteriales bacterium HTCC2170 chromosome, complete genomehypothetical protein6e-1372.8
NC_007604:41495:766147661477063450Synechococcus elongatus PCC 7942, complete genomehypothetical protein6e-1372.8
NC_013421:4006085:402951440295144029933420Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function UPF00476e-1372.8
NC_016609:5890292:592796459279645928386423Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein9e-1372.4
NC_016112:562570:566433566433566864432Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein1e-1271.6
NC_020453:7409402:743160974316097432028420Agromonas oligotrophica S58 DNA, complete genomehypothetical protein3e-1270.5
NC_018607:2375344:237882523788252379241417Brachyspira pilosicoli B2904 chromosome, complete genomehypothetical protein6e-1269.3
NC_015844:3524175:352548935254893525911423Zobellia galactanivorans, complete genomehypothetical protein6e-1269.3
NC_014655:2874640:287743428774342877865432Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein6e-1269.3
NC_007681:600187:617954617954618364411Methanosphaera stadtmanae DSM 3091, complete genomehypothetical protein9e-1268.9
NC_017243:349144:366513366513366929417Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein1e-1168.6
NC_008312:6869160:687112768711276871543417Trichodesmium erythraeum IMS101, complete genomeprotein of unknown function UPF00471e-1168.6
NC_016830:6589575:659462665946266595051426Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-1167.8
NC_007205:1232734:125454012545401254959420Candidatus Pelagibacter ubique HTCC1062, complete genomeUncharacterized protein family UPF0042e-1167.8
NC_019942:987134:989256989256989672417Aciduliprofundum sp. MAR08-339, complete genomesecondary thiamine-phosphate synthase enzyme6e-1166.2
NC_020181:3585898:361778336177833618199417Enterobacter aerogenes EA1509E, complete genomeFIG00638366: hypothetical protein6e-1166.2
NC_018080:6048516:605024060502406050665426Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein6e-1166.2
NC_018643:857911:881334881334881750417Alpha proteobacterium HIMB5 chromosome, complete genomesecondary thiamine-phosphate synthase enzyme5e-1166.2
NC_014532:2298628:231272923127292313148420Halomonas elongata DSM 2581, complete genomehypothetical protein9e-1165.5
NC_013939:1841890:185978018597801860199420Deferribacter desulfuricans SSM1, complete genomehypothetical protein9e-1165.5
NC_020209:4549563:455460745546074555032426Pseudomonas poae RE*1-1-14, complete genomesecondary thiamine-phosphate synthase enzyme2e-1064.7
NC_014363:1605349:161274216127421613170429Olsenella uli DSM 7084 chromosome, complete genomeprotein of unknown function UPF00473e-1063.9
NC_009481:1523764:152844615284461529084639Synechococcus sp. WH 7803 chromosome, complete genomehypothetical protein3e-1063.9
NC_007613:4119771:412717741271774127593417Shigella boydii Sb227, complete genomehypothetical protein7e-1062.8
NC_010658:4257310:426861042686104269026417Shigella boydii CDC 3083-94, complete genomehypothetical protein7e-1062.8
NC_021066:3769405:379075237907523791168417Raoultella ornithinolytica B6, complete genomethiamin phosphate synthase1e-0961.6
NC_003047:2477810:249942824994282499850423Sinorhizobium meliloti 1021, complete genomehypothetical protein2e-0960.8
NC_017322:2191391:221302022130202213442423Sinorhizobium meliloti BL225C chromosome, complete genomehypothetical protein2e-0960.8
NC_008319:787881:803842803842804501660Synechococcus sp. CC9311, complete genomehypothetical protein4e-0960.1
NC_016860:4575772:457661445766144577030417Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein8e-0959.3
NC_016857:4491976:449281844928184493234417Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein8e-0959.3
NC_016856:4482845:448506744850674485483417Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein8e-0959.3
NC_016832:4288980:428982242898224290238417Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-0959.3
NC_016810:4491975:449281744928174493233417Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein8e-0959.3
NC_010102:4396500:439748143974814397897417Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-0959.3
NC_004631:4300457:430129943012994301715417Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-0959.3
NC_003198:4315807:431664943166494317065417Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-0959.3
NC_003197:4470683:447152544715254471941417Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein8e-0959.3
NC_016863:4431831:443267344326734433089417Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein8e-0959.3
NC_017046:4490500:449147844914784491894417Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein8e-0959.3
NC_011080:4461851:446269344626934463109417Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein8e-0959.3
NC_011147:4221000:422198442219844222400417Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-0959.3
NC_006511:4225455:422629742262974226713417Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein7e-0959.3
NC_012125:4400636:440147844014784401894417Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein8e-0959.3
NC_011294:4327904:432874643287464329162417Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein8e-0959.3
NC_011274:4305812:430665443066544307070417Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-0959.3
NC_011205:4486142:448698444869844487400417Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-0959.3
NC_011094:4361238:436208043620804362496417Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein8e-0959.3
NC_011083:4466634:446747644674764467892417Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein8e-0959.3
NC_006905:4405301:440614344061434406559417Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein8e-0959.3
NC_011149:4390315:439115743911574391573417Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein8e-0958.9
NC_012912:777592:794703794703795122420Dickeya zeae Ech1591, complete genomeprotein of unknown function UPF00471e-0858.5
NC_013741:27353:436554365544065411Archaeoglobus profundus DSM 5631, complete genomeprotein of unknown function UPF00476e-0856.2
NC_016831:4286000:428700442870044287420417Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-0754.7