Pre_GI: BLASTN Hits

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Query: NC_010674:2417199 Clostridium botulinum B str. Eklund 17B, complete genome

Start: 2417199, End: 2435099, Length: 17901

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum B str. Eklund 17B is a nonproteolytic botulism neurotoxin B strain. This strain was isolated from marine sediments taken off the coast of Washington, USA and was not associated with botulism. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010723:22318342231834225453622703Clostridium botulinum E3 str. Alaska E43, complete genome0735BLASTN svgBLASTP svg
NC_010516:3368951*3368951339250323553Clostridium botulinum B1 str. Okra, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_020291:59810065981006600872727722Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome1e-1075.8BLASTN svgBLASTP svg
NC_015687:3470829*3470829349051819690Clostridium acetobutylicum DSM 1731 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_003030:3465352*3465352348889223541Clostridium acetobutylicum ATCC 824, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_012563:3556763*3556763357533918577Clostridium botulinum A2 str. Kyoto, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_016001:86566686566688901523350Flavobacterium branchiophilum, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_014652:10916101091610111461223003Caldicellulosiruptor hydrothermalis 108 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_014393:1590893*1590893163877247880Clostridium cellulovorans 743B chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013161:27600027600029947223473Cyanothece sp. PCC 8802, complete genome2e-0661.9BLASTN svgBLASTP svg