Pre_GI: BLASTP Hits

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Query: NC_010674:3141228:3143113 Clostridium botulinum B str. Eklund 17B, complete genome

Start: 3143113, End: 3143805, Length: 693

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum B str. Eklund 17B is a nonproteolytic botulism neurotoxin B strain. This strain was isolated from marine sediments taken off the coast of Washington, USA and was not associated with botulism. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014393:1221000:122334312233431224026684Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, Crp/Fnr family1e-48192
NC_008593:1917118:193271019327101933390681Clostridium novyi NT, complete genometranscriptional regulator, Crp/Fnr family( include cyclic nucleotide-binding domain)1e-47189
NC_015681:102000:116429116429117118690Thermodesulfatator indicus DSM 15286 chromosome, complete genomeCrp/Fnr family transcriptional regulator1e-1376.3
NC_017277:3475500:348020134802013480917717Synechocystis sp. PCC 6803, complete genometranscriptional regulator DNR2e-1272.8
NC_017052:3474500:347920134792013479917717Synechocystis sp. PCC 6803 substr. PCC-N, complete genometranscriptional regulator DNR2e-1272.8
NC_017039:3474500:347921234792123479928717Synechocystis sp. PCC 6803 substr. PCC-P, complete genometranscriptional regulator DNR2e-1272.8
NC_000911:3478000:348256834825683483284717Synechocystis sp. PCC 6803, complete genomeDNR protein2e-1272.8
NC_020126:5470090:549252754925275493210684Myxococcus stipitatus DSM 14675, complete genomeCrp/Fnr family transcriptional regulator3e-1168.9
NC_011899:1926000:193808619380861938745660Halothermothrix orenii H 168, complete genomeputative transcriptional regulator, Crp/Fnr family4e-1065.1
NC_020409:437781:497477497477498151675Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, Crp/Fnr family6e-1064.3
NC_008711:3701635:370163537016353702312678Arthrobacter aurescens TC1, complete genomeputative cyclic nucleotide-binding domain2e-0963.2
NC_007930:50801:665926659267296705Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Transcriptional regulator, crp family2e-0962.8
NC_015499:1640500:164275216427521643495744Thermodesulfobium narugense DSM 14796 chromosome, complete genometranscriptional regulator, Crp/Fnr family2e-0962.4
NC_012440:1405879:141651514165151417198684Persephonella marina EX-H1, complete genometranscriptional regulator5e-0961.6
NC_016803:2431672:243454424345442435191648Desulfovibrio desulfuricans ND132 chromosome, complete genomeCarD family transcriptional regulator8e-0960.8
NC_014960:1697818:170794217079421708643702Anaerolinea thermophila UNI-1, complete genomeCrp family transcriptional regulator2e-0859.3
NC_015589:814530:835693835693836349657Desulfotomaculum ruminis DSM 2154 chromosome, complete genomecyclic nucleotide-binding protein3e-0858.9
NC_011296:1821244:183697218369721837646675Thermodesulfovibrio yellowstonii DSM 11347, complete genomecatabolite gene activator3e-0858.5
NC_015588:2939747:294064829406482941325678Isoptericola variabilis 225 chromosome, complete genometranscriptional regulator, Crp/Fnr family9e-0857
NC_009380:3734773:375096037509603751652693Salinispora tropica CNB-440 chromosome, complete genomeCRP/FNR family transcriptional regulator2e-0756.2
NC_016052:2335648:234916823491682349875708Tetragenococcus halophilus NBRC 12172, complete genomeFNR-like protein FLP2e-0755.8
NC_013530:3365742:336760333676033368280678Xylanimonas cellulosilytica DSM 15894, complete genometranscriptional regulator, Crp/Fnr family3e-0755.5
NC_015957:10403997:104039971040399710404671675Streptomyces violaceusniger Tu 4113 chromosome, complete genomeCrp/Fnr family transcriptional regulator3e-0755.5
NC_004557:2078000:209454120945412095230690Clostridium tetani E88, complete genometranscriptional regulatory protein5e-0754.7
NC_020410:3547345:355258035525803553296717Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completetranscriptional regulator (FNR/CAP family)1e-0653.5
NC_014206:2912945:293092529309252931617693Geobacillus sp. C56-T3 chromosome, complete genomeCrp/Fnr family transcriptional regulator2e-0653.1
NC_002936:285527:286986286986287729744Dehalococcoides ethenogenes 195, complete genometranscriptional regulator, Crp/Fnr family4e-0652
NC_008609:2643000:264311826431182643834717Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, Crp/Fnr family8e-0650.8