Pre_GI: BLASTP Hits

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Query: NC_010674:1986000:2007120 Clostridium botulinum B str. Eklund 17B, complete genome

Start: 2007120, End: 2008484, Length: 1365

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum B str. Eklund 17B is a nonproteolytic botulism neurotoxin B strain. This strain was isolated from marine sediments taken off the coast of Washington, USA and was not associated with botulism. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010520:2101515:2125335212533521266031269Clostridium botulinum A3 str. Loch Maree, complete genomephage portal protein, SPP1 family5e-70265
NC_010516:2305110:2327007232700723282841278Clostridium botulinum B1 str. Okra, complete genomephage portal protein, SPP1 family1e-65250
NC_014377:1227850:1249444124944412507211278Thermosediminibacter oceani DSM 16646 chromosome, complete genomephage portal protein, SPP1 family7e-56218
NC_021182:2765000:2781017278101727824591443Clostridium pasteurianum BC1, complete genomePhage portal protein, SPP1 Gp61e-54214
NC_021182:4367736:4367736436773643691631428Clostridium pasteurianum BC1, complete genomePhage portal protein, SPP1 Gp65e-53208
NC_016641:2587000:2610361261036126116711311Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-37157
NC_018867:1407163:142213014221301422996867Dehalobacter sp. CF chromosome, complete genomePortal protein, phage associated6e-2099
NC_013891:1639694:1650344165034416517351392Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomephage portal protein, SPP1, putative3e-1480.1
NC_017200:1137639:1136309113630911376521344Bacillus thuringiensis serovar finitimus YBT-020 chromosome,SPP1 family phage portal protein1e-1378.2
NC_009674:2985878:3005254300525430066091356Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeSPP1 family phage portal protein4e-1272.8
NC_020272:2748733:2778964277896427803671404Bacillus amyloliquefaciens IT-45, complete genomephage Portal protein1e-0862
NC_015558:1425271:1431403143140314327131311Streptococcus parauberis KCTC 11537 chromosome, complete genomeportal protein5e-0756.2