Pre_GI: BLASTN Hits

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Query: NC_010673:82586 Borrelia hermsii DAH, complete genome

Start: 82586, End: 101099, Length: 18514

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008710:79100*7910010268323584Borrelia turicatae 91E135, complete genome07628BLASTN svgBLASTP svg
NC_015914:3197772*3197772322471226941Cyclobacterium marinum DSM 745 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013216:3408608*3408608343378525178Desulfotomaculum acetoxidans DSM 771, complete genome9e-0660BLASTN svgBLASTP svg
NC_011296:102650*10265012914226493Thermodesulfovibrio yellowstonii DSM 11347, complete genome9e-0660BLASTN svgBLASTP svg