Pre_GI: BLASTP Hits

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Query: NC_010673:908940:918778 Borrelia hermsii DAH, complete genome

Start: 918778, End: 919710, Length: 933

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:900586:915443915443916429987Borrelia turicatae 91E135, complete genomecarbamate kinase3e-124444
NC_014410:2149886:215348421534842154440957Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,carbamate kinase1e-67256
NC_015555:693461:711914711914712858945Thermoanaerobacterium xylanolyticum LX-11 chromosome, completecarbamate kinase2e-67256
NC_014328:2588994:259378525937852594738954Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecarbamate kinase3e-67255
NC_019970:2190695:219730021973002198256957Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecarbamate kinase5e-67254
NC_000868:834872:849737849737850681945Pyrococcus abyssi GE5, complete genomecarbamate kinase3e-64245
NC_011529:1375920:137592013759201376867948Thermococcus onnurineus NA1, complete genomecarbamate kinase-like carbamoyl phosphate synthetase5e-63241
NC_010723:575254:587380587380588312933Clostridium botulinum E3 str. Alaska E43, complete genomecarbamate kinase8e-63240
NC_010674:615963:623365623365624297933Clostridium botulinum B str. Eklund 17B, complete genomecarbamate kinase5e-62238
NC_013515:183088:221649221649222581933Streptobacillus moniliformis DSM 12112, complete genomecarbamate kinase6e-62238
NC_015680:663341:688211688211689155945Pyrococcus yayanosii CH1 chromosome, complete genomecarbamate kinase5e-61234
NC_009922:2323083:232516323251632326104942Alkaliphilus oremlandii OhILAs, complete genomeaspartate/glutamate/uridylate kinase1e-59230
NC_017095:2143845:216355121635512164486936Fervidobacterium pennivorans DSM 9078 chromosome, complete genomecarbamate kinase2e-58226
NC_016641:5808113:583357158335715834533963Paenibacillus terrae HPL-003 chromosome, complete genomeputative amino acid kinase7e-58224
NC_018515:1354511:135551813555181356468951Desulfosporosinus meridiei DSM 13257 chromosome, complete genomecarbamate kinase9e-57220
NC_006322:1119471:113825811382581139190933Bacillus licheniformis ATCC 14580, complete genomecarbamate kinase9e-57220
NC_006270:1119000:113740411374041138336933Bacillus licheniformis ATCC 14580, complete genomecarbamate kinase9e-57220
NC_018704:347948:356106356106357038933Amphibacillus xylanus NBRC 15112, complete genomecarbamate kinase1e-56220
NC_007644:2205599:221292622129262213864939Moorella thermoacetica ATCC 39073, complete genomecarbamate kinase2e-56219
NC_018604:2253539:226145322614532262394942Brachyspira pilosicoli WesB complete genomecarbamate kinase ArcC7e-56217
NC_014014:713506:733000733000733929930Mycoplasma crocodyli MP145 chromosome, complete genomecarbamate kinase9e-56217
NC_013165:1407000:144438714443871445352966Slackia heliotrinireducens DSM 20476, complete genomecarbamate kinase1e-55216
NC_014330:768232:798665798665799606942Brachyspira pilosicoli 95/1000 chromosome, complete genomecarbamate kinase ArcC2e-55216
NC_019908:2401577:242149724214972422438942Brachyspira pilosicoli P43/6/78 chromosome, complete genomeamino acid kinase2e-55216
NC_012225:47800:671676716768108942Brachyspira hyodysenteriae WA1, complete genomecarbamate kinase3e-55215
NC_018607:2111581:214168021416802142621942Brachyspira pilosicoli B2904 chromosome, complete genomecarbamate kinase ArcC3e-55215
NC_017243:2190000:222497622249762225917942Brachyspira intermedia PWS/A chromosome, complete genomecarbamate kinase4e-55214
NC_014150:2994000:300391030039103004851942Brachyspira murdochii DSM 12563 chromosome, complete genomecarbamate kinase4e-55214
NC_004461:205068:218768218768219700933Staphylococcus epidermidis ATCC 12228, complete genomecarbamate kinase6e-54211
NC_008712:215499:227243227243228136894Arthrobacter aurescens TC1 plasmid TC1, complete sequenceCarbamoyl phosphate synthetase-like protein7e-53207
NC_004557:2677155:268150326815032682450948Clostridium tetani E88, complete genomecarbamate kinase5e-52204
NC_014618:57707:747897478975739951Enterobacter cloacae SCF1 chromosome, complete genomeCarbamate kinase4e-51202
NC_014498:2127000:214282921428292143776948Streptococcus pneumoniae 670-6B chromosome, complete genomecarbamate kinase8e-51200
NC_010582:2091138:211134821113482112295948Streptococcus pneumoniae CGSP14, complete genomecarbamate kinase1e-50200
NC_008533:1935500:195145219514521952399948Streptococcus pneumoniae D39, complete genomecarbamate kinase1e-50200
NC_003098:1925783:194395019439501944897948Streptococcus pneumoniae R6, complete genomecarbamate kinase1e-50200
NC_012466:2008000:202587320258732026820948Streptococcus pneumoniae JJA, complete genomecarbamate kinase1e-50200
NC_011900:2107133:212647621264762127423948Streptococcus pneumoniae ATCC 700669, complete genomecarbamate kinase1e-50200
NC_012467:1997484:201752420175242018471948Streptococcus pneumoniae P1031, complete genomecarbamate kinase2e-50199
NC_012468:2069238:208710720871072088054948Streptococcus pneumoniae 70585, complete genomecarbamate kinase3e-50199
NC_004461:73390:980139801398942930Staphylococcus epidermidis ATCC 12228, complete genomecarbamate kinase6e-50197
NC_000854:1222836:124591612459161246866951Aeropyrum pernix K1, complete genomecarbamate kinase2e-45182
NC_012778:688621:707247707247708185939Eubacterium eligens ATCC 27750, complete genomecarbamate kinase4e-45181
NC_016807:359916:359916359916360845930Mycoplasma pneumoniae 309, complete genomecarbamate kinase5e-45181
NC_000912:356677:361468361468362397930Mycoplasma pneumoniae M129, complete genomecarbamate kinase5e-45181
NC_010334:835500:847898847898848839942Shewanella halifaxensis HAW-EB4, complete genomecarbamate kinase5e-38158
NC_021064:1705961:171300817130081713913906Propionibacterium avidum 44067, complete genomecarbamate kinase1e-37157
NC_009832:3500000:350745535074553508381927Serratia proteamaculans 568, complete genomecarbamate kinase2e-37156
NC_016645:2387023:239902123990212399935915Pyrobaculum sp. 1860 chromosome, complete genomecarbamate kinase5e-37154
NC_013960:1484824:150351015035101504418909Nitrosococcus halophilus Nc4 chromosome, complete genomecarbamate kinase9e-37154
NC_012691:2614603:268024126802412681149909Tolumonas auensis DSM 9187, complete genomecarbamate kinase2e-35149
NC_015968:511282:512409512409513320912Enterobacter asburiae LF7a chromosome, complete genomecarbamate kinase3e-35149
NC_015424:4251369:426475242647524265678927Aeromonas veronii B565 chromosome, complete genomecarbamate kinase2e-34146