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Query: NC_010673:908940:6588 Borrelia hermsii DAH, complete genome

Start: 6588, End: 7667, Length: 1080

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:900586:6285628573581074Borrelia turicatae 91E135, complete genomehypothetical membrane spanning protein1e-134479
NC_011244:1:1913419134202251092Borrelia recurrentis A1, complete genomehypothetical protein2e-129462
NC_009778:4188000:4224523422452342255361014Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1377
NC_009850:934374:9582659582659593501086Arcobacter butzleri RM4018, complete genomeputative permease2e-1273.9
NC_004088:1909880:1921048192104819221331086Yersinia pestis KIM, complete genometransport protein2e-1273.6
NC_017187:906877:9251879251879262721086Arcobacter butzleri ED-1, complete genomeputative transport protein2e-1273.6
NC_005810:2508671:2519622251962225206801059Yersinia pestis biovar Microtus str. 91001, complete genomeputative transport protein2e-1273.6
NC_003143:2741478:2749698274969827507561059Yersinia pestis CO92, complete genomehypothetical protein2e-1273.6
NC_008150:2173708:2181508218150821825661059Yersinia pestis Antiqua, complete genomehypothetical protein2e-1273.6
NC_017168:2999514:3011677301167730127351059Yersinia pestis A1122 chromosome, complete genomepheromone autoinducer 2 transporter2e-1273.6
NC_009663:851143:8547468547468558041059Sulfurovum sp. NBC37-1, complete genomehypothetical protein3e-0963.2
NC_009436:2056000:2072462207246220734961035Enterobacter sp. 638, complete genometransporter3e-0963.2
NC_019940:1670262:1674423167442316755471125Thioflavicoccus mobilis 8321 chromosome, complete genomepermease8e-0961.6
NC_015638:23654:4419744197452251029Lacinutrix sp. 5H-3-7-4 chromosome, complete genomehypothetical protein1e-0861.2
NC_018515:989616:99944399944310004741032Desulfosporosinus meridiei DSM 13257 chromosome, complete genomepermease8e-0651.6