Pre_GI: BLASTP Hits

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Query: NC_010673:82586:96529 Borrelia hermsii DAH, complete genome

Start: 96529, End: 97470, Length: 942

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:79100:964539645397394942Borrelia turicatae 91E135, complete genomeGTPase4e-165580
NC_011244:94756:108689108689109630942Borrelia recurrentis A1, complete genomehypothetical protein1e-150532
NC_015500:1923514:195950219595021960458957Treponema brennaborense DSM 12168 chromosome, complete genomeribosome biogenesis GTPase RsgA3e-47189
NC_014934:2482934:250262325026232503576954Cellulophaga algicola DSM 14237 chromosome, complete genomeribosome biogenesis gtpase rsga9e-41167
NC_012691:2614603:2719878271987827209121035Tolumonas auensis DSM 9187, complete genomeribosome small subunit-dependent GTPase A5e-40165
NC_016513:1185241:1199838119983812008781041Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeribosome-associated GTPase8e-39160
NC_013416:875758:8903578903578913971041Aggregatibacter actinomycetemcomitans D11S-1, complete genomeribosome small subunit-dependent GTPase A8e-39160
NC_016002:2453919:245610924561092456981873Pseudogulbenkiania sp. NH8B, complete genomeribosome small subunit-dependent GTPase A4e-38159
NC_020134:2237421:223873222387322239616885Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative ribosome biogenesis GTPase RsgA1e-37157
NC_009654:2958316:2983072298307229841061035Marinomonas sp. MWYL1, complete genomeribosome-associated GTPase2e-36153
NC_002570:2616899:262072226207222621606885Bacillus halodurans C-125, complete genomeribosome-associated GTPase1e-35150
NC_009614:2431005:243625624362562437188933Bacteroides vulgatus ATCC 8482 chromosome, complete genomeribosome-associated GTPase1e-35150
NC_018870:1417851:144051414405141441389876Thermacetogenium phaeum DSM 12270 chromosome, complete genomeribosome biogenesis GTPase RsgA2e-34146
NC_010184:3713359:373516737351673736048882Bacillus weihenstephanensis KBAB4, complete genomeribosome small subunit-dependent GTPase A2e-34146
NC_011658:3603009:366430436643043665185882Bacillus cereus AH187 chromosome, complete genomeribosome-associated GTPase2e-34146
NC_016771:3599170:361680236168023617683882Bacillus cereus NC7401, complete genomehypothetical protein2e-34146
NC_017200:3701043:372066037206603721541882Bacillus thuringiensis serovar finitimus YBT-020 chromosome,GTPase RsgA2e-34146
NC_012581:559182:561424561424562305882Bacillus anthracis str. CDC 684 chromosome, complete genomeribosome-associated GTPase2e-34145
NC_005945:3636321:367694936769493677830882Bacillus anthracis str. Sterne, complete genomeribosome-associated GTPase2e-34145
NC_011725:3862094:388094838809483881829882Bacillus cereus B4264 chromosome, complete genomeribosome-associated GTPase2e-34145
NC_016605:1033000:105169610516961052622927Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeribosome small subunit-dependent GTPase A3e-34145
NC_016584:4905310:491729449172944918187894Desulfosporosinus orientis DSM 765 chromosome, complete genomeribosome small subunit-dependent GTPase A5e-34145
NC_018515:3909646:392272339227233923613891Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeribosome small subunit-dependent GTPase A5e-33141
NC_007677:1354500:141023614102361411210975Salinibacter ruber DSM 13855, complete genomeribosome small subunit-dependent GTPase A1e-32140
NC_002950:1981155:199988919998892000836948Porphyromonas gingivalis W83, complete genomeribosome-associated GTPase4e-32138
NC_015571:168617:192366192366193313948Porphyromonas gingivalis TDC60, complete genomeribosome-associated GTPase5e-32138
NC_015873:1901939:192133019213301922193864Megasphaera elsdenii DSM 20460, complete genomeputative ribosome biogenesis GTPase RsgA3e-31135
NC_012121:837586:839766839766840641876Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein5e-31135
NC_018868:3229381:3232754323275432337941041Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeGTPase RsgA7e-31134
NC_008054:1194000:120967312096731210566894Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative GTP-binding protein8e-30130
NC_009012:686740:703585703585704469885Clostridium thermocellum ATCC 27405, complete genomeribosome small subunit-dependent GTPase A6e-29128
NC_015760:2009425:200942520094252010297873Streptococcus salivarius CCHSS3, complete genomeputative GTPase engC9e-28124
NC_015875:1926981:192698119269811927859879Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeGTPase RsgA1e-27123
NC_014657:944000:950671950671951543873Caldicellulosiruptor owensensis OL chromosome, complete genomeribosome small subunit-dependent gtpase a2e-26119
NC_009953:3852436:3855767385576738568551089Salinispora arenicola CNS-205 chromosome, complete genomeribosome small subunit-dependent GTPase A3e-26119
NC_011899:1437981:1447570144757014486731104Halothermothrix orenii H 168, complete genomeribosome small subunit-dependent GTPase A6e-26118
NC_016048:4163225:4176270417627041773461077Oscillibacter valericigenes Sjm18-20, complete genomeputative ribosome biogenesis GTPase RsgA8e-26117
NC_013665:918313:9454769454769465521077Methanocella paludicola SANAE, complete genomeprobable GTPase EngC6e-25115
NC_020291:3900046:3918950391895039200231074Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative ribosome biogenesis GTPase RsgA 16e-25115
NC_013729:3573000:3576362357636235774351074Kribbella flavida DSM 17836, complete genomeribosome small subunit-dependent GTPase A2e-23110
NC_013959:1195249:1209531120953112105891059Sideroxydans lithotrophicus ES-1 chromosome, complete genomeGTPase EngC1e-23110
NC_009483:936000:9421349421349432161083Geobacter uraniireducens Rf4 chromosome, complete genomeribosome small subunit-dependent GTPase A9e-24110
NC_018012:1789028:1795832179583217969051074Thiocystis violascens DSM 198 chromosome, complete genomeribosome small subunit-dependent GTPase A3e-23109
NC_014150:648868:6699226699226710131092Brachyspira murdochii DSM 12563 chromosome, complete genomeribosome small subunit-dependent GTPase A4e-23108
NC_015637:819233:8325818325818336271047Vibrio anguillarum 775 chromosome chromosome II, complete sequenceGTPase2e-22106
NC_012918:1660477:1682321168232116833881068Geobacter sp. M21 chromosome, complete genomeribosome small subunit-dependent GTPase A4e-22105
NC_010172:1079127:1085219108521910862531035Methylobacterium extorquens PA1, complete genomeGTPase EngC3e-21102
NC_011886:404661:4079224079224089441023Arthrobacter chlorophenolicus A6, complete genomeGTPase EngC6e-21101
NC_015953:4908069:4912014491201449130301017Streptomyces sp. SirexAA-E chromosome, complete genomeGTPase EngC6e-21101
NC_011757:1146608:1153975115397511550091035Methylobacterium chloromethanicum CM4, complete genomeGTPase EngC1e-20100
NC_011146:3206000:3213663321366332147301068Geobacter bemidjiensis Bem, complete genomeribosome small subunit-dependent GTPase A2e-2099.8
NC_013406:3874157:3873087387308738741601074Paenibacillus sp. Y412MC10 chromosome, complete genomeGTPase EngC6e-2098.6
NC_013093:7222000:7237910723791072389441035Actinosynnema mirum DSM 43827, complete genomeGTPase EngC7e-2098.2
NC_007929:653814:661023661023661913891Lactobacillus salivarius subsp. salivarius UCC118, complete genomeGTPase8e-2097.8
NC_012808:806432:811357811357812349993Methylobacterium extorquens AM1, complete genomeputative GTPase8e-2097.8
NC_018524:1279156:1299259129925913003801122Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeribosome small subunit-dependent GTPase A2e-1996.7
NC_014624:1369642:1373597137359713746821086Eubacterium limosum KIST612 chromosome, complete genomeribosome small subunit-dependent GTPase A4e-1995.5
NC_003450:788000:800205800205801089885Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein8e-1994.4
NC_009342:951761:960456960456961445990Corynebacterium glutamicum R chromosome, complete genomehypothetical protein1e-1894
NC_014924:2961970:2978166297816629792811116Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeribosome small subunit-dependent GTPase A2e-1893.6
NC_013895:1282566:1300839130083913018911053Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeribosome small subunit-dependent GTPase A2e-1893.2
NC_010544:362033:363311363311364243933Candidatus Phytoplasma australiense, complete genomeGTPase EngC6e-1891.7
NC_012704:1747539:1770839177083917719931155Corynebacterium kroppenstedtii DSM 44385, complete genomehypothetical protein9e-1891.3
NC_009380:3563421:356669435666943567479786Salinispora tropica CNB-440 chromosome, complete genomeGTPase EngC3e-1582.4