Pre_GI: BLASTP Hits

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Query: NC_010673:479552:506213 Borrelia hermsii DAH, complete genome

Start: 506213, End: 506413, Length: 201

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:488815:503641503641503841201Borrelia turicatae 91E135, complete genomeLSU ribosomal protein L29P9e-28122
NC_015921:481532:499692499692499892201Borrelia bissettii DN127 chromosome, complete genome50S ribosomal protein L293e-25113
NC_006156:484951:503330503330503530201Borrelia garinii PBi chromosome linear, complete sequenceribosomal protein L291e-24111
NC_011728:477439:497107497107497307201Borrelia burgdorferi ZS7, complete genome50S ribosomal protein L292e-24110
NC_001318:479709:501012501012501212201Borrelia burgdorferi B31, complete genomeribosomal protein L29 (rpmC)2e-24110
NC_017238:482222:503316503316503516201Borrelia afzelii PKo chromosome, complete genome50S ribosomal protein L292e-24110
NC_008277:485299:504757504757504957201Borrelia afzelii PKo, complete genomeribosomal protein L292e-24110
NC_017098:652681:663987663987664208222Spirochaeta africana DSM 8902 chromosome, complete genome50S ribosomal protein L291e-1168.6
NC_002967:800109:810737810737810946210Treponema denticola ATCC 35405, complete genomeribosomal protein L299e-1165.5
NC_014484:591291:593923593923594111189Spirochaeta thermophila DSM 6192 chromosome, complete genome50S ribosomal protein L293e-1063.9
NC_018604:2579000:259212625921262592332207Brachyspira pilosicoli WesB complete genome50S ribosomal protein L294e-0753.5
NC_014150:2088012:210497821049782105184207Brachyspira murdochii DSM 12563 chromosome, complete genomeribosomal protein L297e-0752.8
NC_017208:108134:134451134451134651201Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete50S ribosomal protein L298e-0752.4
NC_014171:109280:132402132402132602201Bacillus thuringiensis BMB171 chromosome, complete genome50S ribosomal protein L29P8e-0752.4
NC_007503:2063451:206907820690782069287210Carboxydothermus hydrogenoformans Z-2901, complete genomeribosomal protein L291e-0652.4
NC_012225:2421783:243687024368702437076207Brachyspira hyodysenteriae WA1, complete genome50S ribosomal protein L292e-0651.6
NC_017243:2857681:287283328728332873039207Brachyspira intermedia PWS/A chromosome, complete genome50S ribosomal protein L292e-0651.6
NC_014330:1113145:112732511273251127531207Brachyspira pilosicoli 95/1000 chromosome, complete genome50S ribosomal protein L292e-0651.6
NC_018607:290500:325959325959326165207Brachyspira pilosicoli B2904 chromosome, complete genome50S ribosomal protein L272e-0651.6
NC_019908:2068631:208980720898072090013207Brachyspira pilosicoli P43/6/78 chromosome, complete genome50S ribosomal protein L292e-0651.6
NC_016630:1462788:147036714703671470558192Filifactor alocis ATCC 35896 chromosome, complete genome50S ribosomal protein L291e-0651.6
NC_013921:1977444:200692020069202007129210Thermoanaerobacter italicus Ab9 chromosome, complete genomeribosomal protein L293e-0650.8
NC_014209:1910109:193959319395931939802210Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,ribosomal protein L293e-0650.8
NC_010718:193231:224366224366224563198Natranaerobius thermophilus JW/NM-WN-LF, complete genomeLSU ribosomal protein L29P3e-0650.4
NC_015520:2280643:228286022828602283060201Mahella australiensis 50-1 BON chromosome, complete genome50S ribosomal protein L29P4e-0650.4
NC_015682:736746:750663750663750860198Thermodesulfobacterium sp. OPB45 chromosome, complete genome50S ribosomal protein L294e-0650.1
NC_015958:2251619:229008922900892290298210Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome50S ribosomal protein L294e-0650.1
NC_015519:197836:218219218219218434216Tepidanaerobacter sp. Re1 chromosome, complete genome50S ribosomal protein L295e-0649.7
NC_009922:542500:563994563994564197204Alkaliphilus oremlandii OhILAs, complete genomeribosomal protein L296e-0649.7
NC_017294:1457262:146502814650281465237210Candidatus Arthromitus sp. SFB-mouse-Yit, complete genome50S ribosomal protein L296e-0649.3
NC_015913:1491393:149863614986361498845210Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome50S ribosomal protein L296e-0649.3
NC_010320:881351:909413909413909622210Thermoanaerobacter sp. X514 chromosome, complete genome50S ribosomal protein L298e-0649.3
NC_014538:1998180:200496220049622005171210Thermoanaerobacter sp. X513 chromosome, complete genome50S ribosomal protein L298e-0649.3
NC_014964:388458:418891418891419100210Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete50S ribosomal protein L298e-0649.3