Pre_GI: BLASTP Hits

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Query: NC_010673:479552:503136 Borrelia hermsii DAH, complete genome

Start: 503136, End: 503432, Length: 297

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:488815:500564500564500860297Borrelia turicatae 91E135, complete genomeLSU ribosomal protein L23P2e-42170
NC_011244:497212:517676517676517972297Borrelia recurrentis A1, complete genome50S ribosomal protein L235e-42169
NC_006156:484951:500215500215500511297Borrelia garinii PBi chromosome linear, complete sequenceribosomal protein L233e-39160
NC_001318:479709:497880497880498191312Borrelia burgdorferi B31, complete genomeribosomal protein L23 (rplW)3e-39160
NC_015921:481532:496575496575496871297Borrelia bissettii DN127 chromosome, complete genomeribosomal L23 family protein5e-39159
NC_008277:485299:501645501645501941297Borrelia afzelii PKo, complete genomeribosomal protein L234e-39159
NC_011728:477439:493990493990494286297Borrelia burgdorferi ZS7, complete genome50S ribosomal protein L234e-39159
NC_017238:482222:500204500204500500297Borrelia afzelii PKo chromosome, complete genomeribosomal L23 family protein4e-39159
NC_017098:652681:661025661025661309285Spirochaeta africana DSM 8902 chromosome, complete genome50S ribosomal protein L232e-1477.4
NC_002939:3108907:312762931276293127913285Geobacter sulfurreducens PCA, complete genomeribosomal protein L237e-1269.3
NC_009483:1253077:127466012746601274944285Geobacter uraniireducens Rf4 chromosome, complete genome50S ribosomal protein L233e-1167
NC_007517:687276:701595701595701879285Geobacter metallireducens GS-15, complete genomeribosomal L23 protein5e-1166.6
NC_014654:2101500:211127821112782111568291Halanaerobium sp. 'sapolanicus' chromosome, complete genomeRibosomal protein L25/L232e-1064.7
NC_013525:766848:782622782622782921300Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomeRibosomal protein L25/L232e-1064.7
NC_014330:1113145:113022111302211130520300Brachyspira pilosicoli 95/1000 chromosome, complete genome50S ribosomal protein L232e-1064.3
NC_019908:2068631:208681820868182087117300Brachyspira pilosicoli P43/6/78 chromosome, complete genome50S ribosomal protein L232e-1064.3
NC_018607:290500:322970322970323269300Brachyspira pilosicoli B2904 chromosome, complete genome50S ribosomal protein L232e-1064.3
NC_018604:2579000:259502225950222595321300Brachyspira pilosicoli WesB complete genome50S ribosomal protein L232e-1064.3
NC_011899:124500:137954137954138244291Halothermothrix orenii H 168, complete genomeRibosomal protein L25/L233e-1063.9
NC_002967:800109:807774807774808058285Treponema denticola ATCC 35405, complete genomeribosomal protein L236e-1062.8
NC_019978:178277:199367199367199657291Halobacteroides halobius DSM 5150, complete genomeribosomal protein L239e-1062.4
NC_014150:2088012:210198821019882102287300Brachyspira murdochii DSM 12563 chromosome, complete genomeRibosomal protein L25/L238e-1062.4
NC_017243:2857681:287573028757302876023294Brachyspira intermedia PWS/A chromosome, complete genome50S ribosomal protein L232e-0961.2
NC_012225:2421783:243388624338862434179294Brachyspira hyodysenteriae WA1, complete genome50S ribosomal protein L232e-0961.2
NC_011761:292903:294160294160294453294Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete50S ribosomal protein L232e-0961.2
NC_011206:469901:472674472674472967294Acidithiobacillus ferrooxidans ATCC 53993, complete genomeRibosomal protein L25/L232e-0961.2
NC_016148:698388:699011699011699307297Thermovirga lienii DSM 17291 chromosome, complete genome50S ribosomal protein L233e-0960.8
NC_010644:1491357:150492115049211505217297Elusimicrobium minutum Pei191, complete genomeribosomal protein L25/L234e-0960.1
NC_020411:215432:239547239547239846300Hydrogenobaculum sp. HO, complete genomeRibosomal protein L25/L235e-0959.7
NC_011126:219379:242183242183242482300Hydrogenobaculum sp. Y04AAS1, complete genomeRibosomal protein L25/L235e-0959.7
NC_015587:215433:239549239549239848300Hydrogenobaculum sp. SHO chromosome, complete genomeRibosomal protein L25/L235e-0959.7
NC_015557:215397:239513239513239812300Hydrogenobaculum sp. 3684 chromosome, complete genomeRibosomal protein L25/L235e-0959.7
NC_008148:2156873:216708521670852167372288Rubrobacter xylanophilus DSM 9941, complete genomeRibosomal protein L25/L237e-0959.3
NC_007912:1231436:124623812462381246534297Saccharophagus degradans 2-40, complete genome50S ribosomal protein L231e-0858.9
NC_011047:416566:425655425655425939285Candidatus Phytoplasma mali, complete genome50S ribosomal protein L232e-0858.2
NC_013522:1213599:122345412234541223750297Thermanaerovibrio acidaminovorans DSM 6589, complete genomeRibosomal protein L25/L232e-0857.8
NC_014355:1257105:127142912714291271722294Candidatus Nitrospira defluvii, complete genome50S ribosomal protein L235e-0856.6
NC_014011:655266:666584666584666880297Aminobacterium colombiense DSM 12261 chromosome, complete genomeRibosomal protein L25/L236e-0856.2
NC_010718:193231:221369221369221650282Natranaerobius thermophilus JW/NM-WN-LF, complete genomeLSU ribosomal protein L23P6e-0856.2
NC_013595:1100230:111445211144521114754303Streptosporangium roseum DSM 43021, complete genome50S ribosomal protein L237e-0855.8
NC_016001:2980245:299360629936062993896291Flavobacterium branchiophilum, complete genome50S ribosomal protein L238e-0855.8
NC_009615:2772000:278853827885382788831294Parabacteroides distasonis ATCC 8503 chromosome, complete genome50S ribosomal protein L232e-0755.1
NC_014152:305955:319598319598319885288Thermincola sp. JR, complete genomeRibosomal protein L25/L231e-0755.1
NC_000918:1:499049905301312Aquifex aeolicus VF5, complete genomeribosomal protein L231e-0755.1
NC_009616:979861:989953989953990258306Thermosipho melanesiensis BI429 chromosome, complete genomeribosomal protein L25/L232e-0754.7
NC_000853:1480478:149683914968391497141303Thermotoga maritima MSB8, complete genomeribosomal protein L232e-0754.7
NC_015942:2669292:268337726833772683670294Acidithiobacillus ferrivorans SS3 chromosome, complete genome50S ribosomal protein L25/L232e-0754.7
NC_007760:2175992:218490721849072185200294Anaeromyxobacter dehalogenans 2CP-C, complete genomeribosomal protein L25/L232e-0754.3
NC_011145:2190531:219921421992142199507294Anaeromyxobacter sp. K, complete genomeRibosomal protein L25/L233e-0753.9
NC_011891:2264853:227353722735372273830294Anaeromyxobacter dehalogenans 2CP-1, complete genomeRibosomal protein L25/L233e-0753.9
NC_007716:517356:531026531026531316291Aster yellows witches'-broom phytoplasma AYWB, complete genomeLSU ribosomal protein L23P4e-0753.5
NC_005303:235406:244512244512244802291Onion yellows phytoplasma OY-M, complete genomeribosomal protein L234e-0753.5
NC_010814:1390817:139664013966401396924285Geobacter lovleyi SZ, complete genomeRibosomal protein L25/L234e-0753.5
NC_011653:1226035:123713112371311237436306Thermosipho africanus TCF52B, complete genomeribosomal protein L236e-0753.1
NC_010483:1385000:140394814039481404250303Thermotoga sp. RQ2, complete genomeRibosomal protein L25/L235e-0753.1
NC_013642:1317114:132752713275271327829303Thermotoga naphthophila RKU-10, complete genomeRibosomal protein L25/L235e-0753.1
NC_009486:1293510:130392313039231304225303Thermotoga petrophila RKU-1 chromosome, complete genome50S ribosomal protein L235e-0753.1
NC_015601:1229909:124189012418901242174285Erysipelothrix rhusiopathiae str. Fujisawa, complete genome50S ribosomal protein L236e-0752.8
NC_014632:1914500:192833919283391928626288Ilyobacter polytropus DSM 2926 chromosome, complete genome50S ribosomal protein L237e-0752.8
NC_007503:2063451:207190220719022072189288Carboxydothermus hydrogenoformans Z-2901, complete genomeribosomal protein L231e-0652.4
NC_011661:998562:101590610159061016193288Dictyoglomus turgidum DSM 6724, complete genomeRibosomal protein L25/L239e-0752.4
NC_011059:2233993:224701022470102247339330Prosthecochloris aestuarii DSM 271, complete genomeRibosomal protein L25/L238e-0752.4
NC_017025:653217:662325662325662615291Flavobacterium indicum GPTSA100-9, complete genome50S ribosomal protein L238e-0752.4
NC_009441:395427:405948405948406238291Flavobacterium johnsoniae UW101 chromosome, complete genome50S ribosomal protein L238e-0752.4
NC_014148:602864:607022607022607330309Planctomyces limnophilus DSM 3776 chromosome, complete genomeRibosomal protein L25/L231e-0652
NC_008639:2786447:279695027969502797261312Chlorobium phaeobacteroides DSM 266, complete genomeRibosomal protein L25/L231e-0652
NC_013173:3132517:315027731502773150567291Desulfomicrobium baculatum DSM 4028, complete genomeRibosomal protein L25/L231e-0652
NC_015711:5761030:576746957674695767762294Myxococcus fulvus HW-1 chromosome, complete genome50S ribosomal protein L232e-0651.6
NC_011297:833387:848523848523848810288Dictyoglomus thermophilum H-6-12, complete genomeribosomal protein L232e-0651.6
NC_015160:2768000:278151427815142781804291Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRibosomal protein L25/L232e-0651.6
NC_015277:2096266:210454021045402104830291Sphingobacterium sp. 21 chromosome, complete genomeRibosomal protein L25/L231e-0651.6
NC_014377:112992:129284129284129574291Thermosediminibacter oceani DSM 16646 chromosome, complete genomeLSU ribosomal protein L23P1e-0651.6
NC_014815:622048:626861626861627163303Micromonospora sp. L5 chromosome, complete genomeribosomal protein l25/l231e-0651.6
NC_014391:6175531:618159661815966181898303Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeRibosomal protein L25/L231e-0651.6
NC_020156:585500:597014597014597304291Nonlabens dokdonensis DSW-6, complete genome50S ribosomal protein L231e-0651.6
NC_018645:4049831:406523540652354065522288Desulfobacula toluolica Tol2, complete genome50S ribosomal protein L23 RplW2e-0651.2
NC_009718:1207360:122227112222711222573303Fervidobacterium nodosum Rt17-B1, complete genomeribosomal protein L25/L232e-0651.2
NC_013939:1767262:178369917836991783980282Deferribacter desulfuricans SSM1, complete genome50S ribosomal protein L232e-0651.2
NC_005027:4180502:419406041940604194383324Rhodopirellula baltica SH 1, complete genome50S ribosomal protein L232e-0651.2
NC_003454:128000:139820139820140107288Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeLSU ribosomal protein L23P2e-0651.2
NC_007759:291368:315161315161315451291Syntrophus aciditrophicus SB, complete genomeLSU ribosomal protein L23P3e-0650.8
NC_014220:2239594:225911022591102259397288Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeRibosomal protein L25/L232e-0650.8
NC_016510:2579127:261248126124812612768288Flavobacterium columnare ATCC 49512 chromosome, complete genome50S ribosomal protein L232e-0650.8
NC_014165:597000:627761627761628063303Thermobispora bispora DSM 43833 chromosome, complete genomeRibosomal protein L25/L233e-0650.4
NC_016112:3840053:386196438619643862266303Methylomicrobium alcaliphilum chromosome, complete genome50S ribosomal protein L233e-0650.4
NC_005085:4499500:451349045134904513798309Chromobacterium violaceum ATCC 12472, complete genome50S ribosomal protein L233e-0650.4
NC_011978:975333:984141984141984443303Thermotoga neapolitana DSM 4359, complete genome50S ribosomal protein L233e-0650.4
NC_018721:1071066:107826610782661078556291Psychroflexus torquis ATCC 700755 chromosome, complete genomeLSU ribosomal protein L23p (L23Ae) RplW3e-0650.4
NC_015164:2305415:232006023200602320353294Bacteroides salanitronis DSM 18170 chromosome, complete genomeRibosomal protein L25/L233e-0650.4
NC_006908:291539:300148300148300789642Mycoplasma mobile 163K, complete genome50S ribosomal protein L233e-0650.4
NC_017080:3452121:346287134628713463152282Phycisphaera mikurensis NBRC 102666, complete genome50S ribosomal protein L233e-0650.4
NC_013216:293571:314506314506314790285Desulfotomaculum acetoxidans DSM 771, complete genomeRibosomal protein L25/L233e-0650.4
NC_017094:828836:872749872749873036288Leptospirillum ferrooxidans C2-3, complete genome50S ribosomal protein L233e-0650.4
NC_007577:1517000:153722115372211537523303Prochlorococcus marinus str. MIT 9312, complete genome50S ribosomal protein L235e-0650.1
NC_014666:7641060:766382776638277664123297Frankia sp. EuI1c chromosome, complete genomeRibosomal protein L25/L234e-0650.1
NC_017519:805643:814520814520815014495Mycoplasma hyorhinis MCLD chromosome, complete genome50S ribosomal protein L236e-0649.7
NC_016829:483860:495022495022495516495Mycoplasma hyorhinis GDL-1 chromosome, complete genome50S ribosomal protein L236e-0649.7
NC_016751:857359:874574874574874873300Marinitoga piezophila KA3 chromosome, complete genome50S ribosomal protein L236e-0649.7
NC_008816:1476209:149692314969231497225303Prochlorococcus marinus str. AS9601, complete genome50S ribosomal protein L236e-0649.7
NC_012785:2010668:202249020224902022792303Kosmotoga olearia TBF 19.5.1, complete genomeRibosomal protein L25/L238e-0649.3
NC_015572:4209000:422542042254204225719300Methylomonas methanica MC09 chromosome, complete genome50S ribosomal protein L25/L238e-0649.3
NC_008609:708886:723950723950724234285Pelobacter propionicus DSM 2379, complete genomeRibosomal protein L25/L238e-0649.3
NC_014041:4156059:416938341693834169673291Zunongwangia profunda SM-A87 chromosome, complete genome50S ribosomal protein L237e-0649.3
NC_011026:1284966:129570012957001296017318Chloroherpeton thalassium ATCC 35110, complete genomeRibosomal protein L25/L237e-0649.3
NC_014448:487381:498121498121498615495Mycoplasma hyorhinis HUB-1 chromosome, complete genome50S ribosomal protein L236e-0649.3
NC_020304:2306301:231642423164242316711288Desulfocapsa sulfexigens DSM 10523, complete genomeribosomal protein L239e-0648.9