Pre_GI: BLASTP Hits

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Query: NC_010673:479552:488638 Borrelia hermsii DAH, complete genome

Start: 488638, End: 488937, Length: 300

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011244:497212:503298503298503597300Borrelia recurrentis A1, complete genomehypothetical protein1e-44178
NC_015921:481532:483218483218483517300Borrelia bissettii DN127 chromosome, complete genomehypothetical protein4e-37153
NC_006156:484951:486638486638486937300Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein4e-37153
NC_017238:482222:486851486851487150300Borrelia afzelii PKo chromosome, complete genomehypothetical protein7e-37152
NC_008277:485299:488292488292488591300Borrelia afzelii PKo, complete genomehypothetical protein7e-37152
NC_001318:479709:484254484254484586333Borrelia burgdorferi B31, complete genomehypothetical protein9e-37152
NC_011728:477439:480382480382480681300Borrelia burgdorferi ZS7, complete genomehypothetical protein1e-36151
NC_015733:4130000:413001841300184130353336Pseudomonas putida S16 chromosome, complete genomehypothetical protein9e-0855.5
NC_008027:1847040:187045918704591870794336Pseudomonas entomophila L48, complete genomehypothetical protein2e-0754.7
NC_010501:3987615:398908139890813989416336Pseudomonas putida W619, complete genomehypothetical protein3e-0753.9
NC_009092:2589000:261129326112932611622330Shewanella loihica PV-4, complete genomeconserved hypothetical protein 1031e-0652
NC_004757:427483:472265472265472588324Nitrosomonas europaea ATCC 19718, complete genomeDUF149:Conserved hypothetical protein 1031e-0651.6
NC_016147:2337244:233896323389632339283321Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein4e-0650.1
NC_007508:1221500:125962012596201259940321Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein6e-0649.7
NC_016010:1169850:118947611894761189796321Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein9e-0648.9
NC_015410:2258800:228094122809412281267327Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-0548.9