Pre_GI: BLASTP Hits

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Query: NC_010673:388442:392136 Borrelia hermsii DAH, complete genome

Start: 392136, End: 393560, Length: 1425

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:386376:3907883907883922451458Borrelia turicatae 91E135, complete genomehypothetical membrane spanning protein0906
NC_017238:386893:3894683894683908921425Borrelia afzelii PKo chromosome, complete genomealpha,alpha-trehalase0806
NC_008277:387811:3892293892293906531425Borrelia afzelii PKo, complete genomehypothetical protein0806
NC_015921:387451:3888693888693902931425Borrelia bissettii DN127 chromosome, complete genometrehalase0804
NC_011728:376375:3897313897313911551425Borrelia burgdorferi ZS7, complete genometrehalase0803
NC_001318:377039:3903923903923918191428Borrelia burgdorferi B31, complete genomehypothetical protein0803
NC_006156:389152:3891523891523905761425Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein0802
NC_008262:419726:4380444380444406022559Clostridium perfringens SM101, complete genomecell wall surface anchor family protein1e-0965.1
NC_014364:1990000:1995493199549319977872295Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeGlycogen debranching protein2e-0860.8