Pre_GI: BLASTP Hits

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Query: NC_010673:291679:315423 Borrelia hermsii DAH, complete genome

Start: 315423, End: 316817, Length: 1395

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:277207:3147173147173161111395Borrelia turicatae 91E135, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-L- ornithine--D-alanyl-D-alanine ligase0825
NC_011244:319373:3346473346473360441398Borrelia recurrentis A1, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanine ligase0783
NC_017238:272980:3118453118453132361392Borrelia afzelii PKo chromosome, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase0635
NC_009901:4627998:4638663463866346400421380Shewanella pealeana ATCC 700345, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase1e-43177
NC_012781:2802000:2819363281936328207571395Eubacterium rectale ATCC 33656, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase8e-43175
NC_012658:1581486:1593613159361315950011389Clostridium botulinum Ba4 str. 657 chromosome, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase1e-42174
NC_013960:489616:4975584975584989041347Nitrosococcus halophilus Nc4 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase2e-42173
NC_017179:2895571:2906147290614729075201374Clostridium difficile BI1, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase3e-42172
NC_013315:2887559:2898135289813528995081374Clostridium difficile CD196 chromosome, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase3e-42172
NC_013316:2968000:2978693297869329800661374Clostridium difficile R20291, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-ala nine ligase3e-42172
NC_007484:3231937:3244711324471132460751365Nitrosococcus oceani ATCC 19707, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase7e-42171
NC_018697:361339:3712193712193726191401Cycloclasticus sp. P1 chromosome, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase2e-40167
NC_013861:3215640:3232374323237432336991326Legionella longbeachae NSW150, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alani ne ligase3e-40166
NC_016510:2579127:2580913258091325821961284Flavobacterium columnare ATCC 49512 chromosome, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase3e-39163
NC_014315:226693:2299862299862313501365Nitrosococcus watsoni C-113 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase3e-39163
NC_016811:2903871:2915567291556729169521386Legionella pneumophila subsp. pneumophila ATCC 43290 chromosome,UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase3e-39162
NC_002942:2943206:2954902295490229562871386Legionella pneumophila subsp. pneumophila str. Philadelphia 1,UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase3e-39162
NC_006369:2888701:2899235289923529005721338Legionella pneumophila str. Lens, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alani ne ligase2e-38160
NC_006368:3028286:3042162304216230434991338Legionella pneumophila str. Paris, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alani ne ligase1e-38160
NC_014125:3054000:3065698306569830670351338Legionella pneumophila 2300/99 Alcoy chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase1e-38160
NC_018748:2119679:2143493214349321447731281Emticicia oligotrophica DSM 17448 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase5e-38159
NC_015177:1131173:1170834117083411732902457Pedobacter saltans DSM 12145 chromosome, complete genomealanine racemase7e-38158
NC_013037:5442131:5464337546433754656411305Dyadobacter fermentans DSM 18053, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase2e-37157
NC_012846:1551000:1569573156957315709941422Bartonella grahamii as4aup, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanine ligase8e-37155
NC_020301:1132927:1151446115144611528671422Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate--D-alanyl-D-alanine ligase5e-37155
NC_020300:1041523:1060051106005110614781428Bartonella australis Aust/NH1, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate--D-alanyl-D-alanine ligase2e-36153
NC_009494:3119997:3131693313169331329131221Legionella pneumophila str. Corby chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6- diaminopimelate-D-alanyl-D-alanyl ligase1e-35151
NC_020291:2873000:2885417288541728867871371Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase MurF4e-35149
NC_018419:509500:5256225256225269891368Secondary endosymbiont of Ctenarytaina eucalypti chromosome,UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase7e-35148
NC_011565:69427:8622886228875201293Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl- D-alanine ligase1e-33144
NC_009348:381752:4010784010784024331356Aeromonas salmonicida subsp. salmonicida A449, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanineligase3e-33143
NC_005955:1029435:1048023104802310494441422Bartonella quintana str. Toulouse, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanine ligase4e-33142
NC_012560:1260031:1283941128394112853081368Azotobacter vinelandii DJ, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase7e-33142
NC_007969:2885249:2920667292066729221151449Psychrobacter cryohalolentis K5, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase2e-32140
NC_004545:229771:2359382359382373201383Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D- alanyl ligase4e-32139
NC_015276:2769000:2791528279152827928861359Marinomonas mediterranea MMB-1 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase2e-31137
NC_013895:397890:4155734155734172341662Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase2e-31137
NC_019907:773944:7965527965527979791428Liberibacter crescens BT-1 chromosome, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase2e-31137
NC_016632:230500:2395312395312409011371Serratia symbiotica str. 'Cinara cedri' chromosome, completeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase1e-30134
NC_009654:2958316:2960772296077229621181347Marinomonas sp. MWYL1, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase4e-29129
NC_015722:4539:1008510085114701386Candidatus Midichloria mitochondrii IricVA chromosome, completeUDP-N-acetylmuramyl pentapeptide synthase5e-29129
NC_016148:1021138:1032045103204510334391395Thermovirga lienii DSM 17291 chromosome, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase8e-28125
NC_009921:8717659:8719908871990887212511344Frankia sp. EAN1pec, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase2e-27124
NC_014550:2355500:2356600235660023580571458Arthrobacter arilaitensis Re117, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase1e-26121
NC_014033:164670:1656381656381680162379Prevotella ruminicola 23 chromosome, complete genomealanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase4e-26119
NC_000117:845141:8883068883068896581353Chlamydia trachomatis D/UW-3/CX, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminoligase1e-25117
NC_015311:2626850:2669911266991126723912481Prevotella denticola F0289 chromosome, complete genomealanine racemase1e-25117
NC_017096:1147441:1146096114609611474511356Caldisericum exile AZM16c01, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase2e-24114
NC_016751:1227495:1245676124567612469291254Marinitoga piezophila KA3 chromosome, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase2e-24113
NC_014210:1625954:1628915162891516302941380Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/ D-alanyl-D-alanyl ligase4e-24112
NC_004061:237205:2432912432912446631373Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome2e-23110
NC_016783:1636820:1640928164092816424181491Corynebacterium diphtheriae INCA 402 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamino pimelate-D-alanyl-D-alanyl ligase9e-23108
NC_016785:1586546:1590660159066015921501491Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase1e-22108
NC_016799:1667338:1671446167144616729361491Corynebacterium diphtheriae 31A chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase1e-22108
NC_016788:1609011:1613119161311916146091491Corynebacterium diphtheriae HC04 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase4e-22106
NC_016790:1581411:1585519158551915870091491Corynebacterium diphtheriae VA01 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase4e-22106
NC_016787:1605536:1609644160964416111341491Corynebacterium diphtheriae HC03 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase1e-21104
NC_016800:1639373:1643481164348116449711491Corynebacterium diphtheriae BH8 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase4e-21103
NC_015966:2841420:2859300285930028609161617Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase1e-20101
NC_013947:5682895:5690250569025056916021353Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanyl ligase3e-20100
NC_014926:795549:8106878106878119851299Thermovibrio ammonificans HB-1 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase3e-1893.6
NC_020126:5608880:5624518562451856258221305Myxococcus stipitatus DSM 14675, complete genomeUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase5e-1789.7
NC_017187:719206:7199127199127213481437Arcobacter butzleri ED-1, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase5e-1685.9
NC_009850:757418:7574187574187588541437Arcobacter butzleri RM4018, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase5e-1685.9
NC_012581:2178000:219985821998582200598741Bacillus anthracis str. CDC 684 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase7e-1582.4
NC_008146:4936262:4942317494231749448722556Mycobacterium sp. MCS, complete genomeMur ligase, middle region5e-1479.3
NC_008705:4975402:4981457498145749853563900Mycobacterium sp. KMS, complete genomeMur ligase, middle domain protein8e-1479
NC_014117:2684631:2703466270346627066063141Burkholderia sp. CCGE1002 chromosome chromosome 1, completeMur ligase middle domain protein4e-1273.2
NC_015844:3580591:358288835828883583409522Zobellia galactanivorans, complete genomeUDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase, catalytic domain3e-1170.5
NC_015144:693958:7064237064237077541332Weeksella virosa DSM 16922 chromosome, complete genomeUDP-N-acetylmuramoylalanine--D-glutamate ligase1e-1067.8
NC_010830:757854:7693247693247707871464Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1067.8
NC_007168:2415361:2420655242065524227152061Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein3e-1067
NC_018697:361339:3773253773253787791455Cycloclasticus sp. P1 chromosome, complete genomeUDP-N-acetylmuramate--L-alanine ligase6e-0962.8
NC_012658:1581486:1592136159213615935871452Clostridium botulinum Ba4 str. 657 chromosome, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase5e-0962.8
NC_012563:1704345:1730453173045317319041452Clostridium botulinum A2 str. Kyoto, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase5e-0962.8
NC_011565:665515:6767026767026780601359Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,UDP-N-acetylmuramoylalanine--D-glutamate ligase8e-0962
NC_015276:2769000:2785358278535827867881431Marinomonas mediterranea MMB-1 chromosome, complete genomeUDP-N-acetylmuramate--L-alanine ligase8e-0858.9
NC_021182:4602683:4616959461695946183381380Clostridium pasteurianum BC1, complete genomeUDP-N-acetylmuramoylalanine--D-glutamate ligase1e-0758.2
NC_009654:2940278:2954638295463829560591422Marinomonas sp. MWYL1, complete genomeUDP-N-acetylmuramate--alanine ligase1e-0758.2
NC_007498:197810:2139722139722152311260Pelobacter carbinolicus DSM 2380, complete genomeUDP-N-acetylmuramyl pentapeptide synthase2e-0757.8
NC_009901:4627998:4632424463242446338931470Shewanella pealeana ATCC 700345, complete genomeUDP-N-acetylmuramate--alanine ligase4e-0756.6
NC_014328:4471995:4486617448661744879931377Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeUDP-N-acetylmuramoylalanine--D-glutamate ligase5e-0756.2
NC_003030:3324834:3338267333826733396551389Clostridium acetobutylicum ATCC 824, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase5e-0756.2
NC_015687:3326461:3339893333989333412811389Clostridium acetobutylicum DSM 1731 chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase5e-0756.2
NC_009615:2902871:2933886293388629352231338Parabacteroides distasonis ATCC 8503 chromosome, complete genomeUDP-N-acetylmuramoylalanine--D-glutamate ligase6e-0755.8
NC_014915:2900209:2920724292072429220281305Geobacillus sp. Y412MC52 chromosome, complete genomeUDP-N-acetylmuramate/alanine ligase1e-0655.1
NC_013411:681907:6819076819076832111305Geobacillus sp. Y412MC61, complete genomeUDP-N-acetylmuramate/alanine ligase1e-0655.1
NC_010516:3807780:3827817382781738291931377Clostridium botulinum B1 str. Okra, complete genomeUDP-N-acetylmuramoylalanine--D-glutamate ligase2e-0654.3
NC_009699:3839575:3859609385960938609851377Clostridium botulinum F str. Langeland chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase3e-0653.9
NC_009495:3735703:3756820375682037581961377Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase3e-0653.9
NC_009697:3711692:3732809373280937341851377Clostridium botulinum A str. ATCC 19397 chromosome, completeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase3e-0653.9
NC_009698:3609881:3629919362991936312951377Clostridium botulinum A str. Hall chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase3e-0653.9
NC_012658:3827500:3847498384749838488741377Clostridium botulinum Ba4 str. 657 chromosome, complete genomeUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase2e-0653.9
NC_012563:4004709:4024744402474440261201377Clostridium botulinum A2 str. Kyoto, complete genomeUDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase2e-0653.9
NC_010520:3837378:3857404385740438587801377Clostridium botulinum A3 str. Loch Maree, complete genomeUDP-N-acetylmuramoylalanine--D-glutamate ligase3e-0653.5
NC_017297:3838189:385882238588223859607786Clostridium botulinum F str. 230613 chromosome, complete genome4e-0653.1
NC_009465:171000:1710681710681724621395Candidatus Vesicomyosocius okutanii HA, complete genomeUDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase8e-0652.4