Pre_GI: BLASTP Hits

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Query: NC_010673:291679:295929 Borrelia hermsii DAH, complete genome

Start: 295929, End: 296150, Length: 222

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008710:277207:295219295219295440222Borrelia turicatae 91E135, complete genomemotility protein3e-23106
NC_017238:272980:292314292314292538225Borrelia afzelii PKo chromosome, complete genomeflagellar family protein6e-2096.3
NC_008277:272741:292075292075292299225Borrelia afzelii PKo, complete genomeflagellar protein6e-2096.3
NC_011728:269853:292573292573292797225Borrelia burgdorferi ZS7, complete genomehypothetical protein8e-1992.4
NC_001318:270488:293205293205293429225Borrelia burgdorferi B31, complete genomeflagellar protein (flbD)8e-1992.4
NC_015921:272517:291754291754291978225Borrelia bissettii DN127 chromosome, complete genomeflagellar family protein2e-1891.3
NC_006156:271410:291973291973292197225Borrelia garinii PBi chromosome linear, complete sequenceflagellar protein9e-1889
NC_021508:775264:793171793171793368198Treponema pallidum subsp. pallidum SS14, complete genomeflagellar protein FlbD3e-0650.4
NC_017268:775000:792941792941793138198Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar protein-like protein3e-0650.4
NC_016844:775334:793629793629793826198Treponema pallidum subsp. pallidum DAL-1 chromosome, completeflagellar protein FlbD3e-0650.4
NC_010741:775000:793139793139793336198Treponema pallidum subsp. pallidum SS14, complete genomeflagellar protein3e-0650.4
NC_000919:773784:791691791691791888198Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar protein (flbD)3e-0650.4
NC_015714:768500:786573786573786770198Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeflagellar protein FlbD3e-0650.4