Pre_GI: BLASTP Hits

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Query: NC_010673:205500:223898 Borrelia hermsii DAH, complete genome

Start: 223898, End: 225679, Length: 1782

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018870:1695588:1699227169922717018632637Thermacetogenium phaeum DSM 12270 chromosome, complete genomealanyl-tRNA synthetase AlaS8e-94345
NC_010483:1441614:1443671144367114462622592Thermotoga sp. RQ2, complete genomealanyl-tRNA synthetase2e-92340
NC_011653:1616423:1627510162751016300892580Thermosipho africanus TCF52B, complete genomealanyl-tRNA synthetase2e-91336
NC_018515:989616:1000830100083010034572628Desulfosporosinus meridiei DSM 13257 chromosome, complete genomealanyl-tRNA synthetase3e-90333
NC_013939:1460142:1476545147654514791602616Deferribacter desulfuricans SSM1, complete genomealanyl-tRNA synthetase3e-90333
NC_014657:1193985:1204789120478912074282640Caldicellulosiruptor owensensis OL chromosome, complete genomealanyl-tRNA synthetase7e-89328
NC_010337:524605:5420305420305446812652Heliobacterium modesticaldum Ice1, complete genomealanyl-tRNA synthetase8e-88325
NC_014377:1298806:1311568131156813142102643Thermosediminibacter oceani DSM 16646 chromosome, complete genomealanyl-tRNA synthetase3e-87323
NC_021182:2422226:2441004244100424436432640Clostridium pasteurianum BC1, complete genomealanine--tRNA ligase2e-87323
NC_016627:3295008:3306923330692333095622640Clostridium clariflavum DSM 19732 chromosome, complete genomealanyl-tRNA synthetase2e-87323
NC_010184:4219257:4229078422907842317202643Bacillus weihenstephanensis KBAB4, complete genomealanyl-tRNA synthetase3e-86319
NC_020272:1311932:1311932131193213145682637Bacillus amyloliquefaciens IT-45, complete genomealanyl-tRNA ligase8e-86318
NC_005957:4169610:4181802418180241844442643Bacillus thuringiensis serovar konkukian str. 97-27, completealanyl-tRNA synthetase1e-85317
NC_011772:4321117:4330636433063643332782643Bacillus cereus G9842, complete genomealanyl-tRNA synthetase2e-85317
NC_017200:4191963:4203967420396742066092643Bacillus thuringiensis serovar finitimus YBT-020 chromosome,alanyl-tRNA synthetase3e-85316
NC_003366:2057656:2057656205765620602952640Clostridium perfringens str. 13, complete genomealanyl-tRNA synthetase3e-85316
NC_011658:4171237:4183421418342141860632643Bacillus cereus AH187 chromosome, complete genomealanyl-tRNA synthetase3e-85316
NC_011969:4065460:4078781407878140814232643Bacillus cereus Q1 chromosome, complete genomealanyl-tRNA synthetase3e-85316
NC_007530:4176462:4192645419264541952872643Bacillus anthracis str. 'Ames Ancestor', complete genomealanyl-tRNA synthetase3e-85316
NC_014335:4113154:4124334412433441269762643Bacillus cereus biovar anthracis str. CI chromosome, completealanyl-tRNA synthetase3e-85316
NC_009699:2733529:2747861274786127505002640Clostridium botulinum F str. Langeland chromosome, complete genomealanyl-tRNA synthetase7e-85315
NC_011830:3786173:3787542378754237901692628Desulfitobacterium hafniense DCB-2, complete genomealanyl-tRNA synthetase9e-85315
NC_014098:1114076:1114076111407611167122637Bacillus tusciae DSM 2912 chromosome, complete genomealanyl-tRNA synthetase1e-84314
NC_014328:1307490:1313692131369213163312640Clostridium ljungdahlii ATCC 49587 chromosome, complete genomealanyl-tRNA synthetase2e-84313
NC_009442:1158268:1178317117831711809352619Streptococcus suis 05ZYH33 chromosome, complete genomealanyl-tRNA synthetase2e-83310
NC_015687:1811573:1828628182862818312732646Clostridium acetobutylicum DSM 1731 chromosome, complete genomealanyl-tRNA synthetase8e-83308
NC_003030:1811820:1827028182702818296732646Clostridium acetobutylicum ATCC 824, complete genomealanyl-tRNA synthetase8e-83308
NC_017295:1809386:1826441182644118290862646Clostridium acetobutylicum EA 2018 chromosome, complete genomealanyl-tRNA synthetase8e-83308
NC_015557:1412917:1432440143244014350102571Hydrogenobaculum sp. 3684 chromosome, complete genomealanyl-tRNA synthetase6e-83308
NC_015587:1414304:1432308143230814348782571Hydrogenobaculum sp. SHO chromosome, complete genomealanyl-tRNA synthetase6e-83308
NC_016012:805680:8056808056808083132634Candidatus Arthromitus sp. SFB-rat-Yit, complete genomealanyl-tRNA synthetase1e-82307
NC_003454:1346500:1354132135413213567352604Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeAlanyl-tRNA synthetase3e-82306
NC_015460:1687684:1705848170584817084722625Gallibacterium anatis UMN179 chromosome, complete genomealanyl-tRNA synthetase3e-82306
NC_011126:1430608:1451996145199614545662571Hydrogenobaculum sp. Y04AAS1, complete genomealanyl-tRNA synthetase5e-82305
NC_005823:905500:9268019268019297342934Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130alanyl-tRNA synthetase7e-81301
NC_008593:1461771:1471092147109214737312640Clostridium novyi NT, complete genomealanyl-tRNA synthetase1e-80300
NC_008095:7172047:7189294718929471919902697Myxococcus xanthus DK 1622, complete genomealanyl-tRNA synthetase2e-80300
NC_015711:4067905:4074205407420540768982694Myxococcus fulvus HW-1 chromosome, complete genomealanyl-tRNA synthetase3e-80300
NC_009943:1499111:1515314151531415179442631Candidatus Desulfococcus oleovorans Hxd3, complete genomealanyl-tRNA synthetase4e-80299
NC_009465:813816:8402758402758428722598Candidatus Vesicomyosocius okutanii HA, complete genomealanyl-tRNA synthetase4e-79295
NC_021150:3505234:3519548351954835221722625Azotobacter vinelandii CA6, complete genomealanyl-tRNA synthetase5e-79295
NC_012560:3505235:3519549351954935221732625Azotobacter vinelandii DJ, complete genomealanyl-tRNA synthetase5e-79295
NC_013517:2909798:2917507291750729201192613Sebaldella termitidis ATCC 33386, complete genomealanyl-tRNA synthetase9e-79295
NC_005773:4028500:4048305404830540509292625Pseudomonas syringae pv. phaseolicola 1448A, complete genomealanyl-tRNA synthetase3e-78293
NC_020541:2769419:2790751279075127933932643Rhodanobacter sp. 2APBS1, complete genomealanyl-tRNA synthetase1e-77291
NC_010694:2971170:2971170297117029737972628Erwinia tasmaniensis, complete genomeAlanyl-tRNA synthetase2e-77290
NC_004129:5204500:5215619521561952182432625Pseudomonas fluorescens Pf-5, complete genomealanyl-tRNA synthetase4e-77289
NC_014150:1304573:1309320130932013118932574Brachyspira murdochii DSM 12563 chromosome, complete genomealanyl-tRNA synthetase4e-77289
NC_013592:3618248:3622334362233436249612628Dickeya dadantii Ech586, complete genomealanyl-tRNA synthetase5e-77288
NC_016818:749673:7697447697447723712628Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completealanine--tRNA ligase6e-77288
NC_012880:1127997:1139780113978011424072628Dickeya dadantii Ech703, complete genomealanyl-tRNA synthetase1e-76288
NC_013971:2876733:2876733287673328793632631Erwinia amylovora ATCC 49946 chromosome, complete genomealanyl-tRNA synthetase2e-76287
NC_008782:2062962:2079348207934820819722625Acidovorax sp. JS42, complete genomealanyl-tRNA synthetase2e-76286
NC_014210:3671495:3675125367512536777912667Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,alanyl-tRNA synthetase4e-76286
NC_013192:1941002:1950348195034819529632616Leptotrichia buccalis DSM 1135, complete genomealanyl-tRNA synthetase1e-75284
NC_014632:402500:4098294098294124352607Ilyobacter polytropus DSM 2926 chromosome, complete genomealanyl-tRNA synthetase1e-75284
NC_007798:112840:1247221247221272682547Neorickettsia sennetsu str. Miyayama, complete genomealanyl-tRNA synthetase1e-75284
NC_017243:393749:4004944004944030972604Brachyspira intermedia PWS/A chromosome, complete genomealanyl-tRNA synthetase2e-75283
NC_013009:122000:1359031359031384492547Neorickettsia risticii str. Illinois, complete genomealanyl-tRNA synthetase3e-75283
NC_014931:3886405:3890057389005738926812625Variovorax paradoxus EPS chromosome, complete genomealanyl-tRNA synthetase3e-75283
NC_014958:3207431:3223643322364332263272685Deinococcus maricopensis DSM 21211 chromosome, complete genomealanyl-tRNA synthetase5e-75282
NC_009482:2051890:2072592207259220753392748Synechococcus sp. RCC307 chromosome, complete genomealanyl-tRNA synthetase6e-74279
NC_007677:1911109:1923136192313619260362901Salinibacter ruber DSM 13855, complete genomealanyl-tRNA synthetase2e-73277
NC_012526:2317862:2327420232742023300952676Deinococcus deserti VCD115, complete genomeputative alanine--tRNA ligase (Alanyl-tRNA synthetase)2e-73276
NC_014032:1972623:1986541198654119894412901Salinibacter ruber M8 chromosome, complete genomealanyl-tRNA synthetase6e-73275
NC_016788:1315877:1335305133530513380072703Corynebacterium diphtheriae HC04 chromosome, complete genomeAlanyl-tRNA synthetase1e-72274
NC_016790:1259356:1302694130269413053962703Corynebacterium diphtheriae VA01 chromosome, complete genomeAlanyl-tRNA synthetase4e-72273
NC_016802:1317365:1336793133679313394952703Corynebacterium diphtheriae HC02 chromosome, complete genomeAlanyl-tRNA synthetase4e-72273
NC_002935:1315019:1362202136220213648682667Corynebacterium diphtheriae NCTC 13129, complete genomealanyl-tRNA synthetase3e-72273
NC_009481:2204629:2226072222607222287472676Synechococcus sp. WH 7803 chromosome, complete genomealanyl-tRNA synthetase3e-72273
NC_016801:1361597:1381022138102213837242703Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeAlanyl-tRNA synthetase4e-72272
NC_016799:1343020:1391346139134613940482703Corynebacterium diphtheriae 31A chromosome, complete genomeAlanyl-tRNA synthetase4e-72272
NC_016789:1334514:1381702138170213844042703Corynebacterium diphtheriae PW8 chromosome, complete genomeAlanyl-tRNA synthetase4e-72272
NC_010551:1462827:1465397146539714680212625Burkholderia ambifaria MC40-6 chromosome 1, complete sequencealanyl-tRNA synthetase1e-71271
NC_000117:845141:8729688729688755952628Chlamydia trachomatis D/UW-3/CX, complete genomealanyl-tRNA synthetase3e-71270
NC_016782:1316467:1335894133589413385962703Corynebacterium diphtheriae 241 chromosome, complete genomeAlanyl-tRNA synthetase3e-71270
NC_016786:1316436:1335864133586413385662703Corynebacterium diphtheriae HC01 chromosome, complete genomeAlanyl-tRNA synthetase3e-71270
NC_016616:3585435:3603585360358536062782694Dechlorosoma suillum PS chromosome, complete genomealanine--tRNA ligase3e-71270
NC_009664:3969609:3969609396960939722902682Kineococcus radiotolerans SRS30216, complete genomealanyl-tRNA synthetase2e-71270
NC_012803:1373500:1376247137624713789582712Micrococcus luteus NCTC 2665, complete genomealanyl-tRNA synthetase2e-71270
NC_004663:5194400:5205400520540052080182619Bacteroides thetaiotaomicron VPI-5482, complete genomealanyl-tRNA synthetase4e-71269
NC_007947:577315:5918045918045944282625Methylobacillus flagellatus KT, complete genomealanyl-tRNA synthetase4e-71269
NC_007516:2277910:2327433232743323301022670Synechococcus sp. CC9605, complete genomealanyl-tRNA synthetase6e-71269
NC_006833:449132:4531104531104557372628Wolbachia endosymbiont strain TRS of Brugia malayi, completeAlanyl-tRNA synthetase2e-70267
NC_009615:2985144:3009799300979930124202622Parabacteroides distasonis ATCC 8503 chromosome, complete genomealanyl-tRNA synthetase4e-70266
NC_010655:1606901:1649138164913816519662829Akkermansia muciniphila ATCC BAA-835, complete genomealanyl-tRNA synthetase3e-69263
NC_009952:1680682:1701885170188517045482664Dinoroseobacter shibae DFL 12, complete genomealanyl-tRNA synthase6e-69262
NC_014166:401815:4235654235654261172553Arcobacter nitrofigilis DSM 7299 chromosome, complete genomealanyl-tRNA synthetase3e-67256
NC_014751:225477:2406792406792433692691Mycoplasma leachii PG50 chromosome, complete genomealanine--tRNA ligase4e-67256
NC_015722:1050023:1062546106254610651252580Candidatus Midichloria mitochondrii IricVA chromosome, completealanyl-tRNA synthetase1e-66254
NC_014733:2201485:2204782220478222074062625Methylovorus sp. MP688 chromosome, complete genomealanyl-tRNA synthetase7e-66252
NC_014932:985882:1008869100886910115322664Bartonella clarridgeiae 73, complete genomeAlanyl-tRNA synthetase7e-64245
NC_011025:183287:1864271864271890842658Mycoplasma arthritidis 158L3-1, complete genomealanyl-tRNA synthetase5e-62239
NC_014391:3103000:3104883310488331060761194Micromonospora aurantiaca ATCC 27029 chromosome, complete genomealanine--tRNA ligase5e-61236
NC_016893:563890:5649305649305675452616Wigglesworthia glossinidia endosymbiont of Glossina morsitansalanyl-tRNA synthetase7e-61235
NC_004344:257471:2757012757012783222622Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-57224
NC_014109:27500:4852648526498061281Candidatus Riesia pediculicola USDA chromosome, complete genomealanyl-tRNA synthetase2e-51204
NC_015216:2276929:2285325228532522880422718Methanobacterium sp. AL-21 chromosome, complete genomealanyl-tRNA synthetase1e-32141
NC_014374:193391:2439302439302466712742Acidilobus saccharovorans 345-15 chromosome, complete genomeAlanyl-tRNA synthetase2e-31137
NC_009776:157311:1713461713461740512706Ignicoccus hospitalis KIN4/I, complete genomealanyl-tRNA synthetase4e-27123
NC_012804:271459:2945282945282972692742Thermococcus gammatolerans EJ3, complete genomeAlanyl-tRNA synthetase (alaS)4e-26120
NC_016051:1681076:1713482171348217162232742Thermococcus sp. AM4 chromosome, complete genomealanyl-tRNA synthetase5e-26119
NC_013407:333387:3448303448303475172688Methanocaldococcus vulcanius M7, complete genomealanyl-tRNA synthetase5e-26119
NC_019791:1272850:1293802129380212965222721Caldisphaera lagunensis DSM 15908 chromosome, complete genomealanine--tRNA ligase/alanyl-tRNA synthetase4e-25116
NC_008698:197294:1980251980252007482724Thermofilum pendens Hrk 5, complete genomealanyl-tRNA synthetase4e-24113
NC_015865:1260461:1263184126318412659252742Thermococcus sp. 4557 chromosome, complete genomealanyl-tRNA synthetase2e-23111
NC_014122:726070:7460587460587486792622Methanocaldococcus infernus ME chromosome, complete genomealanyl-tRNA synthetase3e-23110
NC_012589:1723897:1736190173619017388922703Sulfolobus islandicus L.S.2.15, complete genomealanyl-tRNA synthetase6e-23109
NC_013769:1739363:1751481175148117541832703Sulfolobus islandicus L.D.8.5 chromosome, complete genomealanyl-tRNA synthetase6e-23109
NC_012622:1679812:1690323169032316930252703Sulfolobus islandicus Y.G.57.14 chromosome, complete genomealanyl-tRNA synthetase6e-23109
NC_012632:1745921:1758218175821817609202703Sulfolobus islandicus M.16.27 chromosome, complete genomealanyl-tRNA synthetase5e-23109
NC_012623:929080:9335989335989363002703Sulfolobus islandicus Y.N.15.51 chromosome, complete genomealanyl-tRNA synthetase1e-22108
NC_017276:1525102:1538048153804815407502703Sulfolobus islandicus REY15A chromosome, complete genomealanyl-tRNA synthetase2e-22107
NC_017275:1669587:1682532168253216852342703Sulfolobus islandicus HVE10/4 chromosome, complete genomealanyl-tRNA synthetase3e-22107
NC_012726:1646330:1658450165845016611522703Sulfolobus islandicus M.16.4 chromosome, complete genomealanyl-tRNA synthetase3e-22107
NC_012588:1619376:1632320163232016350222703Sulfolobus islandicus M.14.25 chromosome, complete genomealanyl-tRNA synthetase3e-22107
NC_007955:2281070:2297727229772723004982772Methanococcoides burtonii DSM 6242, complete genomealanyl-tRNA synthetase5e-22106
NC_002754:285759:2916542916542943562703Sulfolobus solfataricus P2, complete genomealanyl-tRNA synthetase6e-21102
NC_015518:1160430:1170786117078611734942709Acidianus hospitalis W1 chromosome, complete genomealanyl-tRNA synthetase2e-20101
NC_003106:1367404:1371315137131513740292715Sulfolobus tokodaii str. 7, complete genomealanyl-tRNA synthetase4e-20100
NC_015435:537483:5395825395825422932712Metallosphaera cuprina Ar-4 chromosome, complete genomealanyl-tRNA synthetase9e-1995.9
NC_013922:1911338:1933155193315519359352781Natrialba magadii ATCC 43099 chromosome, complete genomealanyl-tRNA synthetase1e-1895.1
NC_014205:1331594:1335817133581713385462730Staphylothermus hellenicus DSM 12710 chromosome, complete genomealanyl-tRNA synthetase1e-1895.1
NC_014471:1068000:1082272108227210850162745Ignisphaera aggregans DSM 17230 chromosome, complete genomealanyl-tRNA synthetase4e-1790.5
NC_007181:1238806:1241676124167612443992724Sulfolobus acidocaldarius DSM 639, complete genomealanyl-tRNA synthetase1e-1689
NC_009033:1042500:1053468105346810561972730Staphylothermus marinus F1, complete genomealanyl-tRNA synthetase9e-1685.5
NC_009440:1568500:1577875157787515805892715Metallosphaera sedula DSM 5348 chromosome, complete genomealanyl-tRNA synthetase5e-1583.2
NC_014507:1610409:1625968162596816287062739Methanoplanus petrolearius DSM 11571 chromosome, complete genomealanyl-tRNA synthetase6e-1582.8
NC_017954:345430:3586943586943613992706Thermogladius cellulolyticus 1633 chromosome, complete genomealanyl-tRNA synthetase1e-1481.6
NC_014961:1071424:1076526107652610792522727Desulfurococcus mucosus DSM 2162 chromosome, complete genomealanyl-tRNA synthetase7e-1479.3
NC_014160:869873:8846498846498873752727Thermosphaera aggregans DSM 11486 chromosome, complete genomealanyl-tRNA synthetase1e-1275.5
NC_011766:1035858:1040148104014810428742727Desulfurococcus kamchatkensis 1221n chromosome, complete genomealanyl-tRNA synthetase3e-1273.9
NC_010729:1462135:1476335147633514773451011Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein2e-0757.8