Pre_GI: BLASTN Hits

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Query: NC_010634:2376245 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 2376245, End: 2403185, Length: 26941

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014378:425779*42577944976223984Acetohalobium arabaticum DSM 5501 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008570:1094442*1094442111732922888Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013416:16214691621469165023328765Aggregatibacter actinomycetemcomitans D11S-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008340:480399*48039950429523897Alkalilimnicola ehrlichei MLHE-1, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_009922:2590317*2590317261009919783Alkaliphilus oremlandii OhILAs, complete genome2e-22115BLASTN svgBLASTP svg
NC_011891:2607812*2607812263605028239Anaeromyxobacter dehalogenans 2CP-1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007760:1806136*1806136183371527580Anaeromyxobacter dehalogenans 2CP-C, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011145:2543321*2543321257209928779Anaeromyxobacter sp. K, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021150:582011*58201160222120211Azotobacter vinelandii CA6, complete genome1e-24123BLASTN svgBLASTP svg
NC_012560:582011*58201160222120211Azotobacter vinelandii DJ, complete genome1e-24123BLASTN svgBLASTP svg
NC_015662:15641*156413886623226Buchnera aphidicola (Cinara tujafilina) chromosome, complete1e-1799.6BLASTN svgBLASTP svg
NC_002528:31191*311915005118861Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete1e-33153BLASTN svgBLASTP svg
NC_004545:15650*156506959953950Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome6e-23117BLASTN svgBLASTP svg
NC_008513:13484*134843562522142Buchnera aphidicola str. Cc (Cinara cedri), complete genome1e-27133BLASTN svgBLASTP svg
NC_004061:31500*315005549924000Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome1e-24123BLASTN svgBLASTP svg
NC_005061:214168*21416823856824401Candidatus Blochmannia floridanus, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_014909:219498*21949824042420927Candidatus Blochmannia vafer str. BVAF chromosome, complete genome1e-21113BLASTN svgBLASTP svg
NC_014109:393500*39350043671343214Candidatus Riesia pediculicola USDA chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009465:766893*76689380098034088Candidatus Vesicomyosocius okutanii HA, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011898:2907017*2907017292585518839Clostridium cellulolyticum H10, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009089:117980*11798016311645137Clostridium difficile 630, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009089:1*13459934599Clostridium difficile 630, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_013316:1*14895548955Clostridium difficile R20291, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014376:6296*62963008623791Clostridium saccharolyticum WM1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015737:981712*98171299969317982Clostridium sp. SY8519, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020260:1535394*1535394155809922706Cronobacter sakazakii Sp291, complete genome01233BLASTN svgBLASTP svg
NC_014972:847099*84709987930632208Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006138:3355028*3355028337842323396Desulfotalea psychrophila LSv54, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_006138:1245944*1245944128539239449Desulfotalea psychrophila LSv54, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013216:293571*29357131635022780Desulfotomaculum acetoxidans DSM 771, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015565:1647554*1647554166559918046Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete6e-1487.7BLASTN svgBLASTP svg
NC_015573:3070582*3070582309409923518Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012881:4097552*4097552412001522464Desulfovibrio salexigens DSM 2638, complete genome4e-21111BLASTN svgBLASTP svg
NC_012912:40718594071859411755145693Dickeya zeae Ech1591, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_012912:32591332591334833122419Dickeya zeae Ech1591, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012779:16297311629731165390624176Edwardsiella ictaluri 93-146, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015968:2583721*2583721261035326633Enterobacter asburiae LF7a chromosome, complete genome01427BLASTN svgBLASTP svg
NC_014121:16533851653385167270919325Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete01227BLASTN svgBLASTP svg
NC_009778:14778411477841150009922259Enterobacter sakazakii ATCC BAA-894, complete genome01201BLASTN svgBLASTP svg
NC_014306:2703544*2703544272704423501Erwinia billingiae Eb661, complete genome01298BLASTN svgBLASTP svg
NC_004547:1174650*1174650121156236913Erwinia carotovora subsp. atroseptica SCRI1043, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_004547:3866439*3866439389314026702Erwinia carotovora subsp. atroseptica SCRI1043, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_004547:1062410*1062410108132518916Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004547:91355391355395334239790Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010468:4455201*4455201447359918399Escherichia coli ATCC 8739, complete genome1e-33153BLASTN svgBLASTP svg
NC_009801:13926961392696142187429179Escherichia coli E24377A, complete genome4e-30141BLASTN svgBLASTP svg
CU928160:4248621*4248621427441825798Escherichia coli IAI1 chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_011750:4543135*4543135456499721863Escherichia coli IAI39 chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_000913:4159090*4159090417760618517Escherichia coli K12, complete genome1e-33153BLASTN svgBLASTP svg
NC_010473:4256000*4256000427821222213Escherichia coli str. K-12 substr. DH10B, complete genome1e-33153BLASTN svgBLASTP svg
NC_007946:3683371*3683371370609922729Escherichia coli UTI89, complete genome1e-33153BLASTN svgBLASTP svg
NC_012778:2997*29972589522899Eubacterium eligens ATCC 27750, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010336:1117325*1117325114783030506Francisella philomiragia subsp. philomiragia ATCC 25017, complete1e-0869.9BLASTN svgBLASTP svg
NC_015696:610000*61000065257442575Francisella sp. TX077308 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010677:214712*21471224609931388Francisella tularensis subsp. mediasiatica FSC147, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008601:1658454*1658454167712618673Francisella tularensis subsp. novicida U112, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008245:141982*14198217415532174Francisella tularensis subsp. tularensis FSC 198, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006570:141966*14196617413932174Francisella tularensis subsp. tularensis Schu 4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007645:6350079*6350079637233822260Hahella chejuensis KCTC 2396, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013440:5509790*5509790553637126582Haliangium ochraceum DSM 14365, complete genome4e-27131BLASTN svgBLASTP svg
NC_008789:942309*94230996834126033Halorhodospira halophila SL1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011899:12699*126993674224044Halothermothrix orenii H 168, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011899:948790*94879096756618777Halothermothrix orenii H 168, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010337:2793667*2793667283013736471Heliobacterium modesticaldum Ice1, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_015318:1336282*1336282137604139760Hippea maritima DSM 10411 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_013850:2103469*2103469214696843500Klebsiella variicola At-22 chromosome, complete genome0864BLASTN svgBLASTP svg
NC_009654:4253431*4253431427667923249Marinomonas sp. MWYL1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015572:4209000*4209000424633837339Methylomonas methanica MC09 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015711:5479879*5479879550459924721Myxococcus fulvus HW-1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020126:4430142*4430142445344823307Myxococcus stipitatus DSM 14675, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009662:222964*22296426489641933Nitratiruptor sp. SB155-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013960:2440453*2440453245844817996Nitrosococcus halophilus Nc4 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013960:3379515*3379515340805228538Nitrosococcus halophilus Nc4 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_004757:427483*42748347957952097Nitrosomonas europaea ATCC 19718, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008344:1899317*1899317192509925783Nitrosomonas eutropha C91, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015731:867377*86737792057653200Nitrosomonas sp. Is79A3 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008699:590000*59000061720127202Nocardioides sp. JS614, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014837:23542412354241238131727077Pantoea sp. At-9b chromosome, complete genome1e-45192BLASTN svgBLASTP svg
NC_012917:27862832786283280578619504Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012917:26410002641000266615925160Pectobacterium carotovorum subsp. carotovorum PC1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013421:55319355319358079227600Pectobacterium wasabiae WPP163, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013421:29722692972269300638334115Pectobacterium wasabiae WPP163, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013421:2453078*2453078247692623849Pectobacterium wasabiae WPP163, complete genome1e-172615BLASTN svgBLASTP svg
NC_013421:40060854006085403278526701Pectobacterium wasabiae WPP163, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_016002:1938749*1938749196259923851Pseudogulbenkiania sp. NH8B, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002516:4747154*4747154479172444571Pseudomonas aeruginosa PAO1, complete genome6e-20107BLASTN svgBLASTP svg
NC_015061:2867027*2867027288717520149Rahnella sp. Y9602 chromosome, complete genome01826BLASTN svgBLASTP svg
NC_014824:13306513306515757124507Ruminococcus albus 7 plasmid pRUMAL01, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_007912:1173752*1173752119609122340Saccharophagus degradans 2-40, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006511:4119332*4119332413716217831Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-35159BLASTN svgBLASTP svg
NC_003198:3586000*3586000360812122122Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-35159BLASTN svgBLASTP svg
NC_009832:2969376*2969376299269223317Serratia proteamaculans 568, complete genome01477BLASTN svgBLASTP svg
NC_015566:69190*691909503025841Serratia sp. AS12 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015567:69190*691909503025841Serratia sp. AS9 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008345:32870003287000330729220293Shewanella frigidimarina NCIMB 400, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_008321:1993541*1993541201934825808Shewanella sp. MR-4, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_007384:20074672007467203964532179Shigella sonnei Ss046, complete genome01350BLASTN svgBLASTP svg
NC_010162:573709*57370959609922391Sorangium cellulosum 'So ce 56', complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014364:2246524*2246524228373637213Spirochaeta smaragdinae DSM 11293 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_010572:3363830*3363830342121457385Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007759:291368*29136832274831381Syntrophus aciditrophicus SB, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015578:1940097*1940097198357943483Treponema primitia ZAS-2 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015633:2327500*2327500235796830469Vibrio anguillarum 775 chromosome chromosome I, complete sequence4e-18101BLASTN svgBLASTP svg
NC_004344:589375*58937561664427270Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,4e-27131BLASTN svgBLASTP svg
NC_015224:2618192*2618192263696918778Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,02898BLASTN svgBLASTP svg
NC_015224:88953688953690956920034Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_015224:3892972*3892972393636443393Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,5e-1177.8BLASTN svgBLASTP svg
NC_010159:24409472440947245913218186Yersinia pestis Angola, complete genome07466BLASTN svgBLASTP svg
NC_010159:22523802252380227191719538Yersinia pestis Angola, complete genome011450BLASTN svgBLASTP svg
NC_008150:1705152*1705152174460539454Yersinia pestis Antiqua, complete genome015170BLASTN svgBLASTP svg
NC_005810:2180303*2180303220909928797Yersinia pestis biovar Microtus str. 91001, complete genome023100BLASTN svgBLASTP svg
NC_005810:40453034045303406820222900Yersinia pestis biovar Microtus str. 91001, complete genome1e-33153BLASTN svgBLASTP svg
NC_003143:39874839874842431625569Yersinia pestis CO92, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003143:2433190*2433190245920626017Yersinia pestis CO92, complete genome015170BLASTN svgBLASTP svg
NC_004088:22272782227278224825620979Yersinia pestis KIM, complete genome010200BLASTN svgBLASTP svg
NC_004088:29370772937077296291925843Yersinia pestis KIM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004088:2366000*2366000239081024811Yersinia pestis KIM, complete genome015200BLASTN svgBLASTP svg
NC_008149:27731392773139279513521997Yersinia pestis Nepal516, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008149:1842500*1842500188064438145Yersinia pestis Nepal516, complete genome015240BLASTN svgBLASTP svg
NC_008149:31886031886034352424665Yersinia pestis Nepal516, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006155:18079021807902182857520674Yersinia pseudotuberculosis IP 32953, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006155:2461262*2461262248869127430Yersinia pseudotuberculosis IP 32953, complete genome024030BLASTN svgBLASTP svg
NC_010634:18095001809500182909919600Yersinia pseudotuberculosis PB1/+, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010465:28205002820500286978249283Yersinia pseudotuberculosis YPIII, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010465:22828742282874230925826385Yersinia pseudotuberculosis YPIII, complete genome017380BLASTN svgBLASTP svg