Pre_GI: BLASTP Hits

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Query: NC_010634:4463727:4491620 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 4491620, End: 4491955, Length: 336

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016822:3923908:393761739376173937952336Shigella sonnei 53G, complete genomeuniversal stress protein UspB1e-52204
NC_010473:3722571:373515337351533735488336Escherichia coli str. K-12 substr. DH10B, complete genomepredicted universal stress (ethanol tolerance) protein B1e-52204
NC_011748:3983432:400419240041924004527336Escherichia coli 55989, complete genomeuniversal stress protein UspB1e-52204
AC_000091:3995233:400069540006954001030336Escherichia coli W3110 DNA, complete genomepredicted universal stress (ethanol tolerance) protein B1e-52204
NC_007384:3897000:391073639107363911071336Shigella sonnei Ss046, complete genomehypothetical protein1e-52204
CP002185:3822470:383486438348643835199336Escherichia coli W, complete genomepredicted universal stress (ethanol tolerance) protein B1e-52204
NC_000913:3624826:363740836374083637743336Escherichia coli K12, complete genomeuniversal stress protein UspB1e-52204
CU928145:3983432:400419240041924004527336Escherichia coli 55989 chromosome, complete genomeputative universal stress (ethanol tolerance) protein B1e-52204
NC_004337:3590323:361506736150673615402336Shigella flexneri 2a str. 301, complete genomeuniversal stress protein UspB1e-52204
NC_013941:4249871:426228842622884262623336Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeuniversal stress protein B1e-52204
NC_012967:3549880:357007435700743570409336Escherichia coli B str. REL606 chromosome, complete genomeuniversal stress protein UspB1e-52204
NC_012947:248000:270767270767271102336Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeuniversal stress protein UspB1e-52204
NC_007613:3470314:348434434843443484679336Shigella boydii Sb227, complete genomehypothetical protein1e-52204
NC_011751:4074586:408697840869784087313336Escherichia coli UMN026 chromosome, complete genomeuniversal stress protein UspB1e-52204
NC_008258:3550500:357563335756333575968336Shigella flexneri 5 str. 8401, complete genomehypothetical protein1e-52204
NC_009778:4188000:419180141918014192136336Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-51198
NC_014121:5000069:502066550206655020946282Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeuniversal stress protein UspB3e-43173
NC_010498:3838419:385081138508113851092282Escherichia coli SMS-3-5, complete genomeuniversal stress protein B4e-42169