Pre_GI: BLASTP Hits

Some Help

Query: NC_010634:4463727:4482542 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 4482542, End: 4483951, Length: 1410

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:5000069:5011539501153950130951557Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeTn7-like transposition protein TnsD8e-38158
NC_009838:81913:1135961135961151611566Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceTnsD9e-38158
NC_009349:3396:7627762792431617Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completehypothetical protein8e-33141
CU928145:3983432:399581639958163996613798Escherichia coli 55989 chromosome, complete genomehypothetical protein, Tn7-like transposition protein TnsD (fragment)1e-1791.3
NC_011748:3983432:399581639958163996613798Escherichia coli 55989, complete genomehypothetical protein, Tn7-like transposition protein TnsD (fragment)1e-1791.3
NC_015958:2174731:2180905218090521827911887Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeTn7-like transposition protein D9e-1272
NC_013921:1915377:1920550192055019224391890Thermoanaerobacter italicus Ab9 chromosome, complete genomeTn7-like transposition protein D2e-1170.9
NC_007645:7136956:7186875718687571884071533Hahella chejuensis KCTC 2396, complete genomeTn7-like transposition protein D7e-1168.9
NC_014657:2127500:2132524213252421344011878Caldicellulosiruptor owensensis OL chromosome, complete genometn7-like transposition protein d1e-1068.2
NC_002947:6152500:6166911616691161685091599Pseudomonas putida KT2440, complete genometransposition protein, TnsD-related protein1e-0861.6
NC_007492:6372900:6409988640998864116731686Pseudomonas fluorescens PfO-1, complete genometransposition protein, TnsD-like protein1e-0861.6
NC_020050:1:2404924049253861338Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialhypothetical protein1e-0861.2
NC_010625:1602191:1620142162014216219951854Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein6e-0755.8
NC_010170:209514:2309052309052324011497Bordetella petrii, complete genomeTn7-like transposition protein D2e-0654.7
NC_013959:1059004:1072504107250410740061503Sideroxydans lithotrophicus ES-1 chromosome, complete genomehypothetical protein2e-0654.7
NC_010512:1015557:1043446104344610452211776Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencehypothetical protein2e-0654.3