Pre_GI: BLASTP Hits

Some Help

Query: NC_010634:4001154:4002576 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 4002576, End: 4003178, Length: 603

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006155:4062000:406237040623704062972603Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein7e-115412
NC_010465:660207:675604675604676206603Yersinia pseudotuberculosis YPIII, complete genomeputative phage terminase, small subunit1e-111402
NC_004088:3923804:392380439238043924145342Yersinia pestis KIM, complete genomehypothetical protein7e-61233
NC_009708:633054:648718648718649056339Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-60232
NC_008149:587689:607927607927608265339Yersinia pestis Nepal516, complete genomehypothetical protein3e-60231
NC_005810:3272765:329055032905503290888339Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-60231
NC_009381:460358:480323480323480661339Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-60231
NC_014029:729675:749906749906750244339Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-60231
NC_017154:671816:692058692058692396339Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-60231
NC_008149:587689:607659607659607949291Yersinia pestis Nepal516, complete genomehypothetical protein2e-42172
NC_003143:675622:698088698088698378291Yersinia pestis CO92, complete genomehypothetical protein2e-42172
NC_004088:3923804:392412039241203924410291Yersinia pestis KIM, complete genomehypothetical protein2e-42172
NC_009381:460358:480055480055480345291Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-42172
NC_010505:4396800:441421544142154414817603Methylobacterium radiotolerans JCM 2831, complete genomehypothetical protein4e-1064.7
NC_013941:3182576:318420131842013184773573Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage terminase, small subunit4e-0754.7
NC_012967:786534:791455791455792006552Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein4e-0754.7
UCMB5137:861734:861734861734862534801Bacillus atrophaeus UCMB-5137PBSX defective prophage terminase (small subunit)2e-0652.8
NC_009012:2927793:294521629452162945665450Clostridium thermocellum ATCC 27405, complete genomeTerminase small subunit2e-0652.4
NC_011837:3272752:327410432741043274958855Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-0652.4
NC_009706:3341250:334260233426023343456855Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein2e-0652.4
NC_014319:1613611:163053816305381631290753Leuconostoc gasicomitatum LMG 18811, complete genomeprophage terminase small subunit3e-0652