Pre_GI: BLASTP Hits

Some Help

Query: NC_010634:3762532:3765003 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 3765003, End: 3766427, Length: 1425

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009708:853063:8667838667838682071425Yersinia pseudotuberculosis IP 31758 chromosome, complete genomesugar (glycoside-Pentoside-hexuronide) transporter0914
NC_006155:3846315:3851947385194738533711425Yersinia pseudotuberculosis IP 32953, complete genomeSodium:galactoside symporter (GPH) family protein.0914
NC_010465:868402:8859668859668873901425Yersinia pseudotuberculosis YPIII, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter0911
NC_020272:3325000:3326199332619933275751377Bacillus amyloliquefaciens IT-45, complete genomeputative glucitol transport protein GutA1e-45184
NC_014551:605855:6275006275006288791380Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein3e-45182
NC_000964:649781:6681496681496695401392Bacillus subtilis subsp. subtilis str. 168, complete genomeH+-symporter1e-44181
NC_017190:591139:6131076131076143961290Bacillus amyloliquefaciens LL3 chromosome, complete genomesymporter ynaJ6e-44178
NC_020244:1875834:1893234189323418946251392Bacillus subtilis XF-1, complete genomeH+-symporter6e-41169
NC_018265:75658:7978179781812111431Melissococcus plutonius DAT561 plasmid 1, complete sequencesugar (glycoside-pentoside-hexuronide) transporter7e-41168
NC_000964:1873398:1886560188656018879511392Bacillus subtilis subsp. subtilis str. 168, complete genomeH+-symporter7e-41168
NC_020272:2077795:2104049210404921054401392Bacillus amyloliquefaciens IT-45, complete genomeMelibiose carrier protein Thiomethylgalactoside permease II1e-40167
NC_010067:3247169:3261085326108532625151431Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-39162
NC_016047:1978312:1987662198766219890531392Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein1e-38161
NC_009725:1787262:1796850179685017982411392Bacillus amyloliquefaciens FZB42, complete genomeXynP8e-39161
NC_014976:1:1334513345147361392Bacillus subtilis BSn5 chromosome, complete genomeputative H+-xyloside symporter2e-38160
NC_019842:1847081:1856383185638318577741392Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein3e-38159
NC_017188:1567000:1597427159742715988181392Bacillus amyloliquefaciens TA208 chromosome, complete genomeputative H+-xyloside symporter4e-38159
NC_017195:1852935:1868535186853518699261392Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein6e-38159
NC_020410:1781884:1794239179423917956301392Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative H+-xyloside symporter8e-38158
NC_019896:2158223:2180916218091621823071392Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completesymporter YnaJ7e-38158
NC_014479:1831404:1841137184113718425281392Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative H+-xyloside symporter5e-37155
NC_006347:1006020:1007209100720910085971389Bacteroides fragilis YCH46, complete genomecation symporter2e-36154
NC_016776:998657:99984699984610012341389Bacteroides fragilis 638R, complete genomeputative cation symporter2e-36154
NC_003228:945266:9464559464559478431389Bacteroides fragilis NCTC 9343, complete genomeputative cation symporter2e-36154
NC_021066:3201500:3203435320343532048411407Raoultella ornithinolytica B6, complete genomeGPH family transporter2e-36153
NC_014618:3482053:3493203349320334946031401Enterobacter cloacae SCF1 chromosome, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter6e-36152
NC_012214:897206:9116179116179130321416Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein3e-33143
NC_013971:817284:8360958360958375101416Erwinia amylovora ATCC 49946 chromosome, complete genomemajor facilitator superfamily protein5e-33142
NC_013961:2932348:2933872293387229352871416Erwinia amylovora, complete genomeputative GPH family transporter5e-33142
NC_012967:3769499:3773589377358937749711383Escherichia coli B str. REL606 chromosome, complete genomeputative transporter7e-33142
NC_016902:44744:6353163531649701440Escherichia coli KO11FL chromosome, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter1e-32141
CP002516:44744:6353163531649701440Escherichia coli KO11, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter1e-32141
NC_008253:3941938:3946114394611439475411428Escherichia coli 536, complete genomehypothetical membrane protein YicJ3e-32140
NC_004431:4270305:4272633427263342740721440Escherichia coli CFT073, complete genomeHypothetical symporter yicJ6e-32139
NC_010498:4072681:4079665407966540810471383Escherichia coli SMS-3-5, complete genomesugar glycoside-pentoside-hexuronide (GPH):cation symporter family protein7e-32139
NC_011751:4293966:4295130429513042965121383Escherichia coli UMN026 chromosome, complete genomeputative transporter7e-32139
NC_015663:1356982:1361647136164713630411395Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transporter1e-31138
NC_010468:49074:5584455844572261383Escherichia coli ATCC 8739, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter8e-32138
CP002185:4035502:4041103404110340424851383Escherichia coli W, complete genomepredicted transporter8e-32138
NC_013361:4959323:4966962496696249683441383Escherichia coli O26:H11 str. 11368 chromosome, complete genometransporter8e-32138
NC_012779:3316877:3315516331551633168801365Edwardsiella ictaluri 93-146, complete genomeglucuronide carrier protein8e-32138
NC_011601:4096427:4100603410060341019851383Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransporter2e-31137
NC_011080:4177443:4184944418494441863621419Salmonella enterica subsp. enterica serovar Newport str. SL254,sugar (Glycoside-Pentoside-Hexuronide) transporter3e-31136
NC_003198:3881221:3900832390083239022141383Salmonella enterica subsp. enterica serovar Typhi str. CT18,sodium:galactoside family symporter7e-31135
NC_011149:3863913:3866243386624338676251383Salmonella enterica subsp. enterica serovar Agona str. SL483,sodium:galactoside family symporter7e-31135
NC_012125:3879917:3884059388405938854411383Salmonella enterica subsp. enterica serovar Paratyphi C straintransporter7e-31135
NC_016832:3858815:3875128387512838765101383Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Inner membrane symporter yicJ7e-31135
NC_016860:3964000:3969802396980239711841383Salmonella enterica subsp. enterica serovar Typhimurium strputative transport protein7e-31135
NC_016863:3905875:3908205390820539095871383Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transporter7e-31135
NC_013716:4306695:4384578438457843859691392Citrobacter rodentium ICC168, complete genomeputative carbohydrate transporter3e-30133
NC_010694:891967:9063159063159077301416Erwinia tasmaniensis, complete genomehypothetical protein3e-30133
NC_013171:75110:8922489224905701347Anaerococcus prevotii DSM 20548, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter6e-30132
NC_014618:57707:8000180001813951395Enterobacter cloacae SCF1 chromosome, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter9e-30131
NC_011080:4177443:4186408418640841877901383Salmonella enterica subsp. enterica serovar Newport str. SL254,inner membrane symporter YihP2e-29130
NC_015968:74124:8721187211886021392Enterobacter asburiae LF7a chromosome, complete genomesugar (glycoside-Pentoside-Hexuronide) transporter7e-29129
NC_015275:3594890:3601151360115136025631413Clostridium lentocellum DSM 5427 chromosome, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter4e-28126
NC_016514:506611:5066115066115080021392Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YagG6e-28125
NC_015634:359500:4039044039044052531350Bacillus coagulans 2-6 chromosome, complete genomexylose transporter7e-27122
NC_010571:3322467:3335944333594433373711428Opitutus terrae PB90-1, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter5e-27122
NC_000913:272071:2846192846192860011383Escherichia coli K12, complete genomeCP4-6 prophage; predicted sugar transporter2e-26120
NC_010473:247429:2587232587232601051383Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; predicted sugar transporter2e-26120
AC_000091:273325:2846192846192860011383Escherichia coli W3110 DNA, complete genomepredicted sugar transporter2e-26120
NC_015761:2982000:3008930300893030103571428Salmonella bongori NCTC 12419, complete genomemembrane transport protein4e-26119
NC_010102:25893:4479644796462111416Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-25118
NC_012815:1862373:1876816187681618782611446Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeNa+/xyloside symporter related transporter8e-26118
NC_015428:193817:2123602123602137781419Lactobacillus buchneri NRRL B-30929 chromosome, complete genomesugar (glycoside-Pentoside-Hexuronide) transporter2e-22107
NC_015566:2328771:2336703233670323380911389Serratia sp. AS12 chromosome, complete genomesugar (glycoside-Pentoside-Hexuronide) transporter4e-22106
NC_015567:2328782:2336714233671423381021389Serratia sp. AS9 chromosome, complete genomesugar (glycoside-Pentoside-Hexuronide) transporter4e-22106
NC_015566:2328771:2340415234041523417911377Serratia sp. AS12 chromosome, complete genomesugar (glycoside-Pentoside-Hexuronide) transporter8e-21102
NC_015567:2328782:2340426234042623418021377Serratia sp. AS9 chromosome, complete genomesugar (glycoside-Pentoside-Hexuronide) transporter8e-21102
NC_008525:561000:5621115621115640391929Pediococcus pentosaceus ATCC 25745, complete genomeNa+/xyloside symporter related transporter2e-1997.8
NC_012731:600518:6556946556946571871494Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-1996.3
NC_013171:1731491:1732887173288717342751389Anaerococcus prevotii DSM 20548, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter6e-1995.9
NC_020181:969599:9832189832189846721455Enterobacter aerogenes EA1509E, complete genomeXyloside transporter XynT9e-1995.1
NC_015663:4447984:4452420445242044538741455Enterobacter aerogenes KCTC 2190 chromosome, complete genomesugar (glycoside-Pentoside-Hexuronide) transporter1e-1894.7
NC_011283:4966471:4969854496985449713081455Klebsiella pneumoniae 342 chromosome, complete genomexyloside permease2e-1894
NC_013850:4829455:4832839483283948342931455Klebsiella variicola At-22 chromosome, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter2e-1894
NC_010999:623489:6256706256706270311362Lactobacillus casei, complete genomeXylP protein3e-1893.6
NC_008526:565902:5666605666605680211362Lactobacillus casei ATCC 334, complete genomeNa+/xyloside symporter related transporter4e-1893.2
NC_003919:5023500:5026497502649750279841488Xanthomonas axonopodis pv. citri str. 306, complete genometransport protein5e-1892.8
NC_014328:85290:1245081245081258871380Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cation symporter7e-1892.4
NC_017271:4764404:4767444476744447689311488Xanthomonas campestris pv. raphani 756C chromosome, completetransporter1e-1791.7
NC_020064:3517500:3524731352473135261851455Serratia marcescens FGI94, complete genomeglycoside/pentoside/hexuronide transporter5e-1789.4
NC_012997:1446037:1471524147152414729931470Teredinibacter turnerae T7901, complete genomesugar transporter8e-1789
NC_011978:1500663:1500663150066315020931431Thermotoga neapolitana DSM 4359, complete genomeSugar:cation symporter family protein3e-1687
NC_015152:3100312:3114151311415131156231473Spirochaeta sp. Buddy chromosome, complete genomesugar (glycoside-Pentoside-Hexuronide) transporter4e-1583.2
NC_013714:1830959:1850724185072418521781455Bifidobacterium dentium Bd1, complete genomeLacS Galactoside symporter1e-1378.6
NC_014840:205723:2171292171292185501422Pantoea sp. At-9b plasmid pPAT9B03, complete sequencesugar (Glycoside-Pentoside-Hexuronide) transporter1e-1378.6
NC_008618:1456000:1474510147451014759821473Bifidobacterium adolescentis ATCC 15703, complete genomegalactoside symporter4e-1376.6
NC_013171:1731491:1731491173149117328851395Anaerococcus prevotii DSM 20548, complete genomesugar (Glycoside-Pentoside-Hexuronide) transporter1e-1275.1
NC_017190:1832402:184442818444281845357930Bacillus amyloliquefaciens LL3 chromosome, complete genomesymporter ynaJ3e-1273.6
NC_017191:1568369:159873115987311599660930Bacillus amyloliquefaciens XH7 chromosome, complete genomeH+-xyloside symporter3e-1273.6
NC_018720:2097694:2097694209769420991421449Bifidobacterium asteroides PRL2011 chromosome, complete genometransporter, probably Glucuronide permease3e-1067
NC_014656:1161188:1197332119733211989511620Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein4e-1066.6
NC_016027:229180:2291802291802305201341Gluconacetobacter xylinus NBRC 3288, complete genomemajor facilitator superfamily sugar transporter6e-1065.9
NC_010610:908452:9160549160549180241971Lactobacillus fermentum IFO 3956, complete genomelactose transport protein2e-0964.3
NC_014121:598669:6101466101466116931548Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative oligogalacturonide transporter1e-0861.6
NC_018515:3600869:3621772362177236231271356Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeglycoside/pentoside/hexuronide transporter3e-0860.1
NC_014376:1217000:1257664125766412590311368Clostridium saccharolyticum WM1 chromosome, complete genomemajor facilitator superfamily MFS_18e-0858.9
NC_016818:1291665:1296309129630912978471539Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeNa+/melibiose symporter-like transporter1e-0758.5
NC_015061:1251905:1257512125751212590501539Rahnella sp. Y9602 chromosome, complete genomemajor facilitator superfamily transporter2e-0757.8
NC_012880:1091486:1107852110785211094291578Dickeya dadantii Ech703, complete genomeoligogalacturonide transporter5e-0756.2
NC_018607:921923:9273549273549287931440Brachyspira pilosicoli B2904 chromosome, complete genomesugar/sodium symporter2e-0653.9