Pre_GI: BLASTP Hits

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Query: NC_010634:3269010:3273970 Yersinia pseudotuberculosis PB1/+, complete genome

Start: 3273970, End: 3275097, Length: 1128

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:2560000:2560071256007125611981128Yersinia pestis A1122 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase0731
NC_010159:409500:4335964335964347231128Yersinia pestis Angola, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase0731
NC_011601:2854178:2876115287611528772331119Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase6e-179626
NC_016632:1278500:1294720129472012958351116Serratia symbiotica str. 'Cinara cedri' chromosome, complete1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase5e-170597
NC_014909:589677:6064026064026074901089Candidatus Blochmannia vafer str. BVAF chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase9e-132470
NC_016893:181951:1889621889621900441083Wigglesworthia glossinidia endosymbiont of Glossina morsitans1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase9e-130463
NC_004344:622318:6417796417796428791101Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-129462
NC_014109:326500:3285103285103296551146Candidatus Riesia pediculicola USDA chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase1e-111403
NC_015380:99919:1151291151291162321104Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase9e-100363
NC_018643:1037456:1056095105609510571951101Alpha proteobacterium HIMB5 chromosome, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase3e-99362
NC_007205:499808:5062125062125073121101Candidatus Pelagibacter ubique HTCC1062, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase5e-97354
NC_007493:1672163:1672163167216316732961134Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase3e-94345
NC_011979:2641500:2641583264158326426351053Geobacter sp. FRC-32, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase9e-92337
NC_014973:3290545:3314736331473633157971062Geobacter sp. M18 chromosome, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase2e-90332
NC_014152:1430156:1429092142909214301591068Thermincola sp. JR, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase1e-89330
NC_012563:2721658:2732455273245527335041050Clostridium botulinum A2 str. Kyoto, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase3e-89329
NC_016629:3254000:3266400326640032674941095Desulfovibrio africanus str. Walvis Bay chromosome, complete4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase3e-89328
NC_012658:2584355:2616075261607526171241050Clostridium botulinum Ba4 str. 657 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase2e-87323
NC_017294:758992:7712407712407722471008Candidatus Arthromitus sp. SFB-mouse-Yit, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase6e-85314
NC_020291:1464500:1466848146684814678971050Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG7e-85314
NC_014387:1175927:1176990117699011780541065Butyrivibrio proteoclasticus B316 chromosome 1, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase IspG9e-84310
NC_016627:2799453:2822345282234528234091065Clostridium clariflavum DSM 19732 chromosome, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7e-84310
NC_011898:513835:5151325151325161931062Clostridium cellulolyticum H10, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase9e-83307
NC_014328:1405484:1408910140891014099591050Clostridium ljungdahlii ATCC 49587 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase7e-82304
NC_012778:841934:8658488658488669031056Eubacterium eligens ATCC 27750, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase1e-81303
NC_009850:661802:6641326641326651931062Arcobacter butzleri RM4018, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase5e-81301
NC_011830:3904034:3932245393224539333391095Desulfitobacterium hafniense DCB-2, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase2e-80299
NC_007907:2879568:2903451290345129045451095Desulfitobacterium hafniense Y51, complete genomehypothetical protein8e-80297
NC_013939:1812259:1817530181753018185821053Deferribacter desulfuricans SSM1, complete genome4-hydroy-3-methylbut-2-en-1-yl diphosphate synthase3e-79295
NC_019970:1343670:1360613136061313616771065Thermoanaerobacterium thermosaccharolyticum M0795, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase4e-77288
NC_009718:1024000:1041035104103510421231089Fervidobacterium nodosum Rt17-B1, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase1e-75283
NC_014329:1407880:1422932142293214241071176Corynebacterium pseudotuberculosis FRC41 chromosome, complete4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase4e-75281
NC_016781:1408235:1422870142287014240451176Corynebacterium pseudotuberculosis 3/99-5 chromosome, complete4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase4e-75281
NC_017031:1420738:1422735142273514239101176Corynebacterium pseudotuberculosis P54B96 chromosome, complete4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase4e-75281
NC_017303:1420758:1422755142275514239301176Corynebacterium pseudotuberculosis I19 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase4e-75281
NC_014935:1999653:2001239200123920023061068Nitratifractor saLSUginis DSM 16511 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase8e-73274
NC_013947:2113941:2113941211394121150891149Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase2e-72272
NC_020133:2144752:2168373216837321695361164Mycobacterium liflandii 128FXT, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, IspG7e-71268
NC_010612:2215724:2237857223785722390201164Mycobacterium marinum M, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, IspG1e-70267
NC_013947:5431741:5436180543618054373491170Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase2e-70266
NC_019673:6778401:6800071680007168011591089Saccharothrix espanaensis DSM 44229 complete genome(E)-4-hydroxy-3-methylbut-2-enyl- diphosphatesynthase3e-70265
NC_013131:7401253:7401253740125374023681116Catenulispora acidiphila DSM 44928, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase4e-69262
NC_017095:1333810:1342284134228413433841101Fervidobacterium pennivorans DSM 9078 chromosome, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase9e-68257
NC_010003:2134878:2151942215194221529911050Petrotoga mobilis SJ95, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase3e-62239
NC_017096:779550:7949047949047959471044Caldisericum exile AZM16c01, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase6e-57221
NC_007513:1126914:1145797114579711470021206Synechococcus sp. CC9902, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase2e-53210
NC_005070:1144777:1164997116499711661931197Synechococcus sp. WH 8102, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase2e-52206
NC_005071:835005:8517748517748529941221Prochlorococcus marinus str. MIT 9313, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase3e-48192
NC_019902:2943719:2960955296095529621961242Thioalkalivibrio nitratireducens DSM 14787, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase2e-44179
NC_011901:1398376:1426647142664714278761230Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase4e-42172
NC_010161:2381195:2386672238667223879131242Bartonella tribocorum CIP 105476, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase3e-41169
NC_014932:1387818:1395984139598413972221239Bartonella clarridgeiae 73, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7e-41168
NC_012846:2154000:2157272215727221585131242Bartonella grahamii as4aup, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase1e-40167
NC_008783:119758:1334981334981347541257Bartonella bacilliformis KC583, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase3e-38159
NC_015222:1127675:1137812113781211390501239Nitrosomonas sp. AL212 chromosome, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase8e-38157
NC_008781:1973826:1995694199569419969681275Polaromonas naphthalenivorans CJ2, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase6e-37155
NC_008536:1462344:1473671147367114749181248Solibacter usitatus Ellin6076, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase4e-36152
NC_010287:372000:3878153878153896231809Chlamydia trachomatis 434/Bu, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase5e-36152
NC_017432:45965:6553365533673411809Chlamydia trachomatis G/9301 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase9e-36151
NC_017430:49052:6561865618674261809Chlamydia trachomatis G/11222 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase9e-36151
NC_017429:45965:6553365533673411809Chlamydia trachomatis G/9768 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase9e-36151
NC_017439:45953:6563065630674381809Chlamydia trachomatis E/150 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase9e-36151
NC_017440:45965:6553365533673411809Chlamydia trachomatis G/11074 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase9e-36151
NC_017437:49643:6607866078679071830Chlamydia trachomatis A2497 chromosome, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase9e-36151
NC_007429:49647:6619066190679981809Chlamydia trachomatis A/HAR-13, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase8e-36151
NC_012686:49643:6614466144679521809Chlamydia trachomatis B/Jali20/OT chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase8e-36151
NC_012687:49640:6607566075678831809Chlamydia trachomatis B/TZ1A828/OT chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase8e-36151
NC_016798:49643:6607866078678861809Chlamydia trachomatis A2497, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase8e-36151
NC_007086:2887875:2967977296797729692421266Xanthomonas campestris pv. campestris str. 8004, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase3e-35149
NC_015277:2702056:2702056270205627040682013Sphingobacterium sp. 21 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase1e-33144
NC_006347:4961865:4970192497019249720721881Bacteroides fragilis YCH46, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase2e-32140
NC_016776:4982094:4990423499042349923031881Bacteroides fragilis 638R, complete genomeputative GcpE terpenoid biosynthesis protein2e-32140
NC_003228:4895326:4903652490365249055321881Bacteroides fragilis NCTC 9343, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase2e-32140
NC_015744:367142:3875243875243892301707Chlamydia trachomatis L2c chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase2e-31136
NC_007799:555900:5621455621455633741230Ehrlichia chaffeensis str. Arkansas, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase5e-31135
NC_006833:1011537:1030146103014610314351290Wolbachia endosymbiont strain TRS of Brugia malayi, complete4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase1e-30134
NC_006831:772737:7856977856977869651269Ehrlichia ruminantium str. Gardel, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase2e-30133
NC_006832:776286:7892497892497905171269Ehrlichia ruminantium str. Welgevonden, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase2e-30133
NC_005295:796437:8094008094008106681269Ehrlichia ruminantium str. Welgevonden, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase2e-30133
NC_013009:721823:7282377282377294811245Neorickettsia risticii str. Illinois, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase3e-30132
NC_007798:703922:7103347103347115781245Neorickettsia sennetsu str. Miyayama, complete genome1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase7e-29128
NC_018681:7624000:763143876314387631827390Nocardia brasiliensis ATCC 700358 chromosome, complete genome4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase7e-1478.6