Pre_GI: BLASTN Hits

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Query: NC_010612:6385520 Mycobacterium marinum M, complete genome

Start: 6385520, End: 6408345, Length: 22826

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020133:59655005965500598723221733Mycobacterium liflandii 128FXT, complete genome010530BLASTN svgBLASTP svg
NC_008595:31286131286133836925509Mycobacterium avium 104, complete genome0801BLASTN svgBLASTP svg
NC_002944:29297429297431420821235Mycobacterium avium subsp. paratuberculosis K-10, complete genome0793BLASTN svgBLASTP svg
NC_014815:2639339*2639339265728817950Micromonospora sp. L5 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_014391:6640327*6640327665900418678Micromonospora aurantiaca ATCC 27029 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_009142:267550*26755029023122682Saccharopolyspora erythraea NRRL 2338, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013131:9903320*9903320995737154052Catenulispora acidiphila DSM 44928, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_002755:1095105*1095105111578720683Mycobacterium tuberculosis CDC1551, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013235:593289*59328961584722559Nakamurella multipartita DSM 44233, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010612:95778695778698186224077Mycobacterium marinum M, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015514:3877810*3877810390211124302Cellulomonas fimi ATCC 484 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_020133:2144752*2144752217059925848Mycobacterium liflandii 128FXT, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015848:16475231647523167029122769Mycobacterium canettii CIPT 140010059, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009565:16297801629780165615326374Mycobacterium tuberculosis F11, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_002945:16217651621765164826226498Mycobacterium bovis AF2122/97, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013721:276717*27671730391327197Gardnerella vaginalis 409-05, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010612:61131556113155613265419500Mycobacterium marinum M, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020133:90200090200092552523526Mycobacterium liflandii 128FXT, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010612:22157242215724224185126128Mycobacterium marinum M, complete genome4e-0867.9BLASTN svgBLASTP svg