Pre_GI: BLASTN Hits

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Query: NC_010612:5626259 Mycobacterium marinum M, complete genome

Start: 5626259, End: 5645099, Length: 18841

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010612:90890*9089011475023861Mycobacterium marinum M, complete genome02458BLASTN svgBLASTP svg
NC_010612:38134813813481384114527665Mycobacterium marinum M, complete genome02458BLASTN svgBLASTP svg
NC_002944:865425*86542589916033736Mycobacterium avium subsp. paratuberculosis K-10, complete genome1e-97365BLASTN svgBLASTP svg
NC_008726:63359616335961637742441464Mycobacterium vanbaalenii PYR-1, complete genome4e-54220BLASTN svgBLASTP svg
NC_008726:11425001142500117062228123Mycobacterium vanbaalenii PYR-1, complete genome4e-54220BLASTN svgBLASTP svg
NC_008596:41529164152916417912726212Mycobacterium smegmatis str. MC2 155, complete genome6e-50206BLASTN svgBLASTP svg
NC_014814:42354774235477428692151445Mycobacterium sp. Spyr1 chromosome, complete genome3e-39170BLASTN svgBLASTP svg
NC_014814:4809607*4809607483377924173Mycobacterium sp. Spyr1 chromosome, complete genome1e-38168BLASTN svgBLASTP svg
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome5e-35157BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome8e-31143BLASTN svgBLASTP svg
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome8e-31143BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome8e-31143BLASTN svgBLASTP svg
NC_014814:38920003892000392242630427Mycobacterium sp. Spyr1 chromosome, complete genome5e-29137BLASTN svgBLASTP svg
NC_013169:1759900*1759900178341323514Kytococcus sedentarius DSM 20547, complete genome2e-28135BLASTN svgBLASTP svg
NC_013169:80512480512482366418541Kytococcus sedentarius DSM 20547, complete genome2e-28135BLASTN svgBLASTP svg
NC_011896:2502000*2502000252187519876Mycobacterium leprae Br4923, complete genome7e-25123BLASTN svgBLASTP svg
NC_002677:2500000*2500000252209922100Mycobacterium leprae TN, complete genome7e-25123BLASTN svgBLASTP svg
NC_014215:49285549285551339920545Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,3e-24121BLASTN svgBLASTP svg
NC_014215:42168342168345090929227Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,3e-24121BLASTN svgBLASTP svg
NC_014215:34991734991737916229246Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,3e-24121BLASTN svgBLASTP svg
NC_009142:827912*82791284912621215Saccharopolyspora erythraea NRRL 2338, complete genome1e-23119BLASTN svgBLASTP svg
NC_018681:867230*86723090173034501Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_014550:32637833263783328159917817Arthrobacter arilaitensis Re117, complete genome2e-22115BLASTN svgBLASTP svg
NC_013595:9547254*9547254957863931386Streptosporangium roseum DSM 43021, complete genome1e-20109BLASTN svgBLASTP svg
NC_013170:311045*31104535303541991Cryptobacterium curtum DSM 15641, complete genome3e-18101BLASTN svgBLASTP svg
NC_012590:850130*85013087382523696Corynebacterium aurimucosum ATCC 700975, complete genome3e-18101BLASTN svgBLASTP svg
NC_013159:3554389*3554389357362219234Saccharomonospora viridis DSM 43017, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010545:1781393*1781393180797326581Corynebacterium urealyticum DSM 7109, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_015683:732668*73266875500922342Corynebacterium ulcerans BR-AD22 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_002935:781172*78117280470523534Corynebacterium diphtheriae NCTC 13129, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007164:511171*51117153769026520Corynebacterium jeikeium K411, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014391:621062*62106264468923628Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014550:33778343377834343359955766Arthrobacter arilaitensis Re117, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014815:841484*84148489809956616Micromonospora sp. L5 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015673:397947*39794742438426438Corynebacterium resistens DSM 45100 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013510:991827*991827101259920773Thermomonospora curvata DSM 43183, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_019673:8161242*8161242818734226101Saccharothrix espanaensis DSM 44229 complete genome6e-1383.8BLASTN svgBLASTP svg
NC_008595:14133541413354144379430441Mycobacterium avium 104, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_006361:71494471494473378418841Nocardia farcinica IFM 10152, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_013729:6217500*6217500623574618247Kribbella flavida DSM 17836, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_003888:36027533602753362646223710Streptomyces coelicolor A3(2), complete genome9e-1279.8BLASTN svgBLASTP svg
NC_003155:45920004592000463614444145Streptomyces avermitilis MA-4680, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013174:2163947*2163947218201918073Jonesia denitrificans DSM 20603, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015671:557720*55772057761419895Cellvibrio gilvus ATCC 13127 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015514:3508022*3508022353507127050Cellulomonas fimi ATCC 484 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014151:856354*85635488191525562Cellulomonas flavigena DSM 20109 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_013441:50254445025444505059925156Gordonia bronchialis DSM 43247, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013757:90050090050091836917870Geodermatophilus obscurus DSM 43160, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013131:7401253*7401253742304021788Catenulispora acidiphila DSM 44928, complete genome9e-0660BLASTN svgBLASTP svg
NC_013131:74378317437831745730019470Catenulispora acidiphila DSM 44928, complete genome9e-0660BLASTN svgBLASTP svg
NC_013169:19414101941410196745126042Kytococcus sedentarius DSM 20547, complete genome9e-0660BLASTN svgBLASTP svg
NC_013442:658665864509938514Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequence9e-0660BLASTN svgBLASTP svg
NC_015859:16315731631573165925327681Corynebacterium variabile DSM 44702 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_012803:1094679*1094679111581321135Micrococcus luteus NCTC 2665, complete genome9e-0660BLASTN svgBLASTP svg