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Query: NC_010612:5301135 Mycobacterium marinum M, complete genome

Start: 5301135, End: 5327018, Length: 25884

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020133:49110444911044493609925056Mycobacterium liflandii 128FXT, complete genome012210BLASTN svgBLASTP svg
NC_008611:10151381015138103966724530Mycobacterium ulcerans Agy99, complete genome07985BLASTN svgBLASTP svg
NC_009921:64836606483660651171428055Frankia sp. EAN1pec, complete genome2e-50208BLASTN svgBLASTP svg
NC_009921:56097705609770565619046421Frankia sp. EAN1pec, complete genome4e-30141BLASTN svgBLASTP svg
NC_009525:2635792*2635792265864122850Mycobacterium tuberculosis H37Ra, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015848:2684275*2684275270528621012Mycobacterium canettii CIPT 140010059, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_004129:26091892609189263251823330Pseudomonas fluorescens Pf-5, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_012207:2573562*2573562259732923768Mycobacterium bovis BCG str. Tokyo 172, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010612:4501414*4501414452499223579Mycobacterium marinum M, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008278:14727091472709149653023822Frankia alni ACN14a, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009074:21175002117500214668929190Burkholderia pseudomallei 668 chromosome I, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_008268:36142436142438312821705Rhodococcus sp. RHA1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014831:18189681818968184009921132Thermaerobacter marianensis DSM 12885 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013722:24762362476236250064524410Xanthomonas albilineans, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_000962:18708421870842189534224501Mycobacterium tuberculosis H37Rv, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_002755:18596301859630187892619297Mycobacterium tuberculosis CDC1551, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_002945:18562281856228188073824511Mycobacterium bovis AF2122/97, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008769:18761091876109190061624508Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009525:18723601872360189686024501Mycobacterium tuberculosis H37Ra, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009565:18662141866214189074224529Mycobacterium tuberculosis F11, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012207:18480911848091186924521155Mycobacterium bovis BCG str. Tokyo 172, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015593:22463522246352226475318402Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete8e-0763.9BLASTN svgBLASTP svg
NC_015848:18966601896660192209125432Mycobacterium canettii CIPT 140010059, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_019950:18708631870863189629425432Mycobacterium canettii CIPT 140060008 complete genome8e-0763.9BLASTN svgBLASTP svg
NC_020133:50205005020500504274122242Mycobacterium liflandii 128FXT, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013524:39208939208941440922321Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009921:39990403999040401805519016Frankia sp. EAN1pec, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008699:29167522916752293906622315Nocardioides sp. JS614, complete genome3e-0661.9BLASTN svgBLASTP svg