Query: NC_010612:5301135 Mycobacterium marinum M, complete genome
Start: 5301135, End: 5327018, Length: 25884
Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_020133:4911044 | 4911044 | 4936099 | 25056 | Mycobacterium liflandii 128FXT, complete genome | 0 | 12210 | BLASTN svg | BLASTP svg |
NC_008611:1015138 | 1015138 | 1039667 | 24530 | Mycobacterium ulcerans Agy99, complete genome | 0 | 7985 | BLASTN svg | BLASTP svg |
NC_009921:6483660 | 6483660 | 6511714 | 28055 | Frankia sp. EAN1pec, complete genome | 2e-50 | 208 | BLASTN svg | BLASTP svg |
NC_009921:5609770 | 5609770 | 5656190 | 46421 | Frankia sp. EAN1pec, complete genome | 4e-30 | 141 | BLASTN svg | BLASTP svg |
NC_009525:2635792* | 2635792 | 2658641 | 22850 | Mycobacterium tuberculosis H37Ra, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_015848:2684275* | 2684275 | 2705286 | 21012 | Mycobacterium canettii CIPT 140010059, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_004129:2609189 | 2609189 | 2632518 | 23330 | Pseudomonas fluorescens Pf-5, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_012207:2573562* | 2573562 | 2597329 | 23768 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_010612:4501414* | 4501414 | 4524992 | 23579 | Mycobacterium marinum M, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_008278:1472709 | 1472709 | 1496530 | 23822 | Frankia alni ACN14a, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_009074:2117500 | 2117500 | 2146689 | 29190 | Burkholderia pseudomallei 668 chromosome I, complete sequence | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_008268:361424 | 361424 | 383128 | 21705 | Rhodococcus sp. RHA1, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014831:1818968 | 1818968 | 1840099 | 21132 | Thermaerobacter marianensis DSM 12885 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013722:2476236 | 2476236 | 2500645 | 24410 | Xanthomonas albilineans, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_000962:1870842 | 1870842 | 1895342 | 24501 | Mycobacterium tuberculosis H37Rv, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_002755:1859630 | 1859630 | 1878926 | 19297 | Mycobacterium tuberculosis CDC1551, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_002945:1856228 | 1856228 | 1880738 | 24511 | Mycobacterium bovis AF2122/97, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008769:1876109 | 1876109 | 1900616 | 24508 | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009525:1872360 | 1872360 | 1896860 | 24501 | Mycobacterium tuberculosis H37Ra, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_009565:1866214 | 1866214 | 1890742 | 24529 | Mycobacterium tuberculosis F11, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_012207:1848091 | 1848091 | 1869245 | 21155 | Mycobacterium bovis BCG str. Tokyo 172, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015593:2246352 | 2246352 | 2264753 | 18402 | Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015848:1896660 | 1896660 | 1922091 | 25432 | Mycobacterium canettii CIPT 140010059, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_019950:1870863 | 1870863 | 1896294 | 25432 | Mycobacterium canettii CIPT 140060008 complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_020133:5020500 | 5020500 | 5042741 | 22242 | Mycobacterium liflandii 128FXT, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013524:392089 | 392089 | 414409 | 22321 | Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009921:3999040 | 3999040 | 4018055 | 19016 | Frankia sp. EAN1pec, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008699:2916752 | 2916752 | 2939066 | 22315 | Nocardioides sp. JS614, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |