Pre_GI: BLASTN Hits

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Query: NC_010612:3969244 Mycobacterium marinum M, complete genome

Start: 3969244, End: 4014043, Length: 44800

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020133:3787844*3787844381646528622Mycobacterium liflandii 128FXT, complete genome05245BLASTN svgBLASTP svg
NC_010612:1005778*1005778103880533028Mycobacterium marinum M, complete genome03287BLASTN svgBLASTP svg
NC_020133:942375*94237596559923225Mycobacterium liflandii 128FXT, complete genome03201BLASTN svgBLASTP svg
NC_006361:18279911827991184618418194Nocardia farcinica IFM 10152, complete genome4e-96361BLASTN svgBLASTP svg
NC_002944:18814051881405190464023236Mycobacterium avium subsp. paratuberculosis K-10, complete genome6e-52214BLASTN svgBLASTP svg
NC_014158:15663101566310158807221763Tsukamurella paurometabola DSM 20162 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_013729:2813895*2813895283559921705Kribbella flavida DSM 17836, complete genome3e-29139BLASTN svgBLASTP svg
NC_010612:90890*9089011475023861Mycobacterium marinum M, complete genome2e-27133BLASTN svgBLASTP svg
NC_010612:103081*10308113565632576Mycobacterium marinum M, complete genome2e-27133BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome4e-22115BLASTN svgBLASTP svg
NC_007164:82200082200084597523976Corynebacterium jeikeium K411, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_010612:3745332*3745332378131835987Mycobacterium marinum M, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_014168:1294000*1294000132534231343Segniliparus rotundus DSM 44985 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_020133:77341773419927021930Mycobacterium liflandii 128FXT, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_013521:17134161713416173359920184Sanguibacter keddieii DSM 10542, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008596:421882*42188246586743986Mycobacterium smegmatis str. MC2 155, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_020453:10842381084238114489760660Agromonas oligotrophica S58 DNA, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_020453:10729791072979112047147493Agromonas oligotrophica S58 DNA, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013715:767722*76772279120723486Rothia mucilaginosa DY-18, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010397:4150596*4150596418195931364Mycobacterium abscessus chromosome Chromosome, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_007777:28410002841000290393262933Frankia sp. CcI3, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_020133:2886541*2886541291380027260Mycobacterium liflandii 128FXT, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014814:13974291397429142156724139Mycobacterium sp. Spyr1 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_009077:48103794810379483961029232Mycobacterium sp. JLS, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008268:2313583*2313583234448830906Rhodococcus sp. RHA1, complete genome1e-0663.9BLASTN svgBLASTP svg