Pre_GI: BLASTP Hits

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Query: NC_010612:90890:90890 Mycobacterium marinum M, complete genome

Start: 90890, End: 91492, Length: 603

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018750:3481476:351235535123553512966612Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, TetR family1e-1790.1
NC_008278:667023:681519681519682148630Frankia alni ACN14a, complete genomeputative TetR-family transcriptional regulator5e-1477.8
NC_019673:7598026:760271776027177603478762Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family5e-1477.4
NC_016582:1751988:177005117700511770632582Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR-family protein transcriptional regulator3e-1168.2
NC_013440:4235489:425163642516364252208573Haliangium ochraceum DSM 14365, complete genometranscriptional regulator, TetR family3e-1064.7