Pre_GI: BLASTP Hits

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Query: NC_010612:6385520:6401430 Mycobacterium marinum M, complete genome

Start: 6401430, End: 6402377, Length: 948

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014643:1251847:1270631127063112716381008Rothia dentocariosa ATCC 17931 chromosome, complete genomeglycine betaine/choline ABC transporter substrate-binding protein2e-53209
NC_017317:134671:152773152773153612840Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein8e-38157
NC_009792:2688747:270825827082582709139882Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-2099
NC_009495:1759759:1776428177642817780141587Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeglycine betaine/L-proline ABC transporter permease/substrate-binding protein3e-1996.3
NC_016626:400080:400930400930401826897Burkholderia sp. YI23 plasmid byi_1p, complete sequenceglycine betaine ABC transporter substrate-binding protein2e-1687
NC_015589:3241364:324136432413643242272909Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeglycine betaine ABC transporter substrate-binding protein2e-1480.5
NC_013921:1614397:163324716332471634161915Thermoanaerobacter italicus Ab9 chromosome, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system3e-1479.7
NC_014206:345499:380665380665381567903Geobacillus sp. C56-T3 chromosome, complete genomeglycine betaine ABC transporter substrate-binding protein3e-1479.3
NC_014209:1580423:159786515978651598779915Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,Substrate-binding region of ABC-type glycine betaine transport system9e-1477.8
NC_006510:310212:343938343938344837900Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-1376.6
NC_016593:353505:381669381669382571903Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeproline/glycine betaine ABC-type transport system, permease component fused to periplasmic component2e-1376.6
NC_015425:2528549:2560000256000025615861587Clostridium botulinum BKT015925 chromosome, complete genomeputative glycine betaine/carnitine/choline ABC transporter4e-1375.5
NC_007963:1908964:193346919334691934443975Chromohalobacter salexigens DSM 3043, complete genomeperiplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system-like protein5e-1375.5
NC_007963:2644930:264793626479362648838903Chromohalobacter salexigens DSM 3043, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system7e-1374.7
NC_014614:6115:399003990040787888Clostridium sticklandii, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system precursor2e-1273.2
NC_013411:1168049:118787911878791188781903Geobacillus sp. Y412MC61, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system2e-1273.2
NC_014915:308056:327886327886328788903Geobacillus sp. Y412MC52 chromosome, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system2e-1273.2
NC_014315:2711852:2731698273169827332031506Nitrosococcus watsoni C-113 chromosome, complete genomeglycine betaine ABC transporter substrate-binding protein2e-1273.2
NC_013745:371322:371322371322372266945Haloterrigena turkmenica DSM 5511 plasmid pHTUR02, completeSubstrate-binding region of ABC-type glycine betaine transport system3e-1272.8
NC_014377:210888:218405218405219307903Thermosediminibacter oceani DSM 16646 chromosome, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system7e-1271.6
NC_009727:1899876:1899876189987619014561581Coxiella burnetii Dugway 7E9-12, complete genomeABC transporter, quaternary amine uptake transporter (QAT) family, permease/periplasmic amine-binding protein3e-1169.3
NC_007963:2644930:264696526469652647849885Chromohalobacter salexigens DSM 3043, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system8e-1168.2
NC_018515:4196409:421899242189924219945954Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeglycine betaine/choline ABC transporter substrate-binding protein2e-1067
NC_016605:50695:6941669416709451530Pediococcus claussenii ATCC BAA-344 chromosome, complete genomesubstrate binding domain of ABC-type glycine betaine transport system family protein3e-1065.9
NC_009328:293000:314277314277315179903Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeproline/glycine betaine ABC transporter permease/periplasmic protein5e-1065.5
NC_016023:1143130:1143130114313011446591530Bacillus coagulans 36D1 chromosome, complete genomeglycine betaine ABC transporter periplasmic protein1e-0964.3
NC_020260:1111130:111113011111301112038909Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-0963.9
NC_021175:881845:8818458818458833651521Streptococcus oligofermentans AS 1.3089, complete genomecholine ABC transporter permease2e-0963.5
NC_008525:270310:2858552858552873841530Pediococcus pentosaceus ATCC 25745, complete genomeABC-type proline/glycine betaine transport system, permease and substrate binding protein1e-0860.8
NC_012526:4462:218982189822803906Deinococcus deserti VCD115, complete genomeputative glycine betaine ABC transporter, periplasmic component1e-0860.8
NC_015278:538500:5586705586705602111542Aerococcus urinae ACS-120-V-Col10a chromosome, complete genometoxin-antitoxin system toxin component, PIN family2e-0860.1
NC_007576:1854136:1854136185413618556621527Lactobacillus sakei subsp. sakei 23K, complete genomePutative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunits6e-0858.5
NC_011999:1567818:158383415838341584733900Macrococcus caseolyticus JCSC5402, complete genomeglycine betaine/carnitine/choline ABC-type transporter, substrate-binding protein3e-0756.2
NC_004461:205068:214351214351215310960Staphylococcus epidermidis ATCC 12228, complete genomeglycine betaine/carnitine/choline ABC transporter (osmoprotec) opuCC3e-0755.8