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Query: NC_010612:5653031:5654268 Mycobacterium marinum M, complete genome

Start: 5654268, End: 5655788, Length: 1521

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018681:2447871:2453098245309824544801383Nocardia brasiliensis ATCC 700358 chromosome, complete genomedioxygenase2e-46186
NC_011000:183928:2101032101032114401338Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative dioxygenase1e-42174
NC_015137:868944:8740148740148754951482Burkholderia sp. CCGE1001 chromosome 2, complete sequence9-cis-epoxycarotenoid dioxygenase5e-39162
NC_013929:1670402:1676648167664816781711524Streptomyces scabiei 87.22 chromosome, complete genomedioxygenase1e-37158
NC_015976:3924962:3944121394412139455931473Sphingobium sp. SYK-6, complete genomeputative dioxygenase3e-37156
NC_018581:1718023:1757113175711317586421530Gordonia sp. KTR9 chromosome, complete genomecarotenoid oxygenase5e-37155
NC_010546:2711929:2731069273106927325531485Cyanothece sp. ATCC 51142 chromosome circular, complete sequencelignostilbene-alpha,beta-dioxygenase2e-35150
NC_013595:3541012:3556861355686135581201260Streptosporangium roseum DSM 43021, complete genome9-cis-epoxycarotenoid dioxygenase3e-31136
NC_013929:1611940:1642782164278216442541473Streptomyces scabiei 87.22 chromosome, complete genomedioxygenase3e-27123
NC_008319:262894:2672742672742687881515Synechococcus sp. CC9311, complete genomeRetinal pigment epithelial membrane protein1e-25117
NC_014318:1537732:1551730155173015532921563Amycolatopsis mediterranei U32 chromosome, complete genomecarotenoid cleavage dioxygenase9e-23108
NC_009727:1001203:1016289101628910177011413Coxiella burnetii Dugway 7E9-12, complete genomeputative dioxygenase7e-1995.5
NC_011528:767940:7821207821207835321413Coxiella burnetii CbuK_Q154, complete genomelignostilbene-alpha,beta-dioxygenase2e-1687.4
NC_002971:951102:9556419556419568251185Coxiella burnetii RSA 493, complete genomedioxygenase, putative3e-0757