Pre_GI: BLASTP Hits

Some Help

Query: NC_010612:4837346:4849603 Mycobacterium marinum M, complete genome

Start: 4849603, End: 4850187, Length: 585

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010612:4837346:485727948572794857779501Mycobacterium marinum M, complete genomehypothetical protein1e-1996.3
NC_011898:3367457:341006734100673410594528Clostridium cellulolyticum H10, complete genomeHNH endonuclease3e-1271.2
NC_011894:3671162:367922236792223679866645Methylobacterium nodulans ORS 2060, complete genomeHNH endonuclease1e-1066.2
NC_009633:4097536:410602841060284106537510Alkaliphilus metalliredigens QYMF chromosome, complete genomeNUMOD4 domain-containing protein2e-1065.5
NC_014973:1941500:195500019550001955380381Geobacter sp. M18 chromosome, complete genomeNUMOD4 domain-containing protein5e-0960.8
NC_008571:2553849:256822325682232569161939Gramella forsetii KT0803, complete genomeHNH endonuclease family protein7e-0960.5
NC_014393:937000:952256952256952756501Clostridium cellulovorans 743B chromosome, complete genomeHNH endonuclease8e-0960.1
NC_009782:920272:927128927128927679552Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein2e-0859.3
NC_002758:918827:925683925683926234552Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein2e-0859.3
NC_012918:1697860:170773517077351708259525Geobacter sp. M21 chromosome, complete genomeHNH endonuclease4e-0857.8
NC_014724:1101950:111980611198061120336531Lactobacillus amylovorus GRL 1112 chromosome, complete genomehoming nuclease8e-0857
NC_012121:474144:481699481699482250552Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative HNH-family endonuclease, phage associated2e-0755.8
NC_013198:1095591:112205511220551122597543Lactobacillus rhamnosus GG, complete genomeprophage protein, HNH endodeoxyribonuclease family (HNH homing endonuclease I-HmuI)5e-0754.3
NC_013199:845000:862188862188862718531Lactobacillus rhamnosus Lc 705, complete genomeprophage protein, HNH homing endonuclease family1e-0653.1
NC_016052:1839763:185041518504151850951537Tetragenococcus halophilus NBRC 12172, complete genomehypothetical protein2e-0652
NC_009256:1253384:126519412651941265736543Burkholderia vietnamiensis G4 chromosome 1, complete sequenceNUMOD4 domain-containing protein7e-0650.4