Pre_GI: BLASTN Hits

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Query: NC_010610:2013659 Lactobacillus fermentum IFO 3956, complete genome

Start: 2013659, End: 2051777, Length: 38119

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010610:90845290845293309924648Lactobacillus fermentum IFO 3956, complete genome03083BLASTN svgBLASTP svg
NC_010610:86119486119488392322730Lactobacillus fermentum IFO 3956, complete genome03053BLASTN svgBLASTP svg
NC_010610:79597579597582885432880Lactobacillus fermentum IFO 3956, complete genome03009BLASTN svgBLASTP svg
NC_010610:11784301178430122897750548Lactobacillus fermentum IFO 3956, complete genome03009BLASTN svgBLASTP svg
NC_010610:17650001765000179344828449Lactobacillus fermentum IFO 3956, complete genome02993BLASTN svgBLASTP svg
NC_010610:755000*75500078559930600Lactobacillus fermentum IFO 3956, complete genome02694BLASTN svgBLASTP svg
NC_010999:62348962348964609722609Lactobacillus casei, complete genome02639BLASTN svgBLASTP svg
NC_008505:36638*366386139024753Lactococcus lactis subsp. cremoris SK11 plasmid 3, complete02631BLASTN svgBLASTP svg
NC_010610:16495001649500167265923160Lactobacillus fermentum IFO 3956, complete genome02593BLASTN svgBLASTP svg
NC_010610:1385066*1385066141573130666Lactobacillus fermentum IFO 3956, complete genome02593BLASTN svgBLASTP svg
NC_010610:10750010750013485227353Lactobacillus fermentum IFO 3956, complete genome02535BLASTN svgBLASTP svg
NC_010610:1580483*1580483162924448762Lactobacillus fermentum IFO 3956, complete genome02448BLASTN svgBLASTP svg
NC_008497:32160321605098118822Lactobacillus brevis ATCC 367, complete genome01828BLASTN svgBLASTP svg
NC_010610:269380*26938029559926220Lactobacillus fermentum IFO 3956, complete genome0753BLASTN svgBLASTP svg
NC_015420:35384353846199926616Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, complete0650BLASTN svgBLASTP svg
NC_008526:56590256590259093225031Lactobacillus casei ATCC 334, complete genome1e-148535BLASTN svgBLASTP svg
NC_014727:96677996677998463017852Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,9e-63250BLASTN svgBLASTP svg
NC_008525:56100056100058709926100Pediococcus pentosaceus ATCC 25745, complete genome7e-39170BLASTN svgBLASTP svg
NC_010999:20597382059738208224722510Lactobacillus casei, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015697:256000*25600027836622367Lactobacillus reuteri SD2112 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014106:24483124483126509920269Lactobacillus crispatus ST1, complete genome7e-0867.9BLASTN svgBLASTP svg