Pre_GI: BLASTP Hits

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Query: NC_010610:795975:813168 Lactobacillus fermentum IFO 3956, complete genome

Start: 813168, End: 813842, Length: 675

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008526:343445:354352354352354999648Lactobacillus casei ATCC 334, complete genomeCRISPR-associated protein1e-57222
NC_015737:2146953:215889821588982159530633Clostridium sp. SY8519, complete genomehypothetical protein3e-55214
NC_008054:745704:761596761596762219624Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein5e-51201
NC_008529:735233:753740753740754363624Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated protein5e-51201
NC_014727:798191:816894816894817517624Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated protein7e-51200
NC_013510:3117837:313535531353553136044690Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein, Cse3 family3e-28124
NC_019673:1988853:203734320373432038008666Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated Cse3 family protein7e-28124
NC_014210:1588426:159287215928721593591720Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein, Cse3 family5e-26117
NC_007333:1743890:183983018398301840453624Thermobifida fusca YX, complete genomeCRISPR-associated CT1974 family protein6e-26117
NC_012590:977920:990914990914991606693Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein6e-25114
NC_013131:4422000:442939544293954430105711Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein, Cse3 family7e-24110
NC_015389:481282:493873493873494562690Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein, Cse3 family7e-24110
NC_018720:1812000:181560918156091816298690Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein, Cse3 family7e-23107
NC_016109:603829:615161615161615928768Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein9e-23107
NC_006361:4574536:458588845858884586562675Nocardia farcinica IFM 10152, complete genomehypothetical protein4e-22104
NC_015434:2527412:252741225274122528089678Verrucosispora maris AB-18-032 chromosome, complete genomeCRISPR-associated Cse3 family protein6e-21100
NC_015951:107360:108626108626109270645Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated protein, Cse3 family5e-2097.8
NC_013890:1175931:117994111799411180570630Dehalococcoides sp. GT chromosome, complete genomeCRISPR-associated protein, Cse3 family2e-1685.5
NC_007356:1165760:120409112040911204720630Dehalococcoides sp. CBDB1, complete genomeputative CRISPR-associated protein2e-1685.5
NC_017186:6395435:644496964449696445619651Amycolatopsis mediterranei S699 chromosome, complete genomeCRISPR-associated CSE3 family protein1e-1583.6
NC_014318:6395392:644492564449256445575651Amycolatopsis mediterranei U32 chromosome, complete genomeCRISPR-associated CSE3 family protein1e-1583.6
NC_008278:514600:526796526796527632837Frankia alni ACN14a, complete genomehypothetical protein1e-1480.1
NC_007164:775000:778422778422779096675Corynebacterium jeikeium K411, complete genomehypothetical protein2e-1479.3
NC_015170:54000:665796657967226648Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated protein, Cse3 family9e-1477
NC_008609:2518993:252739825273982528072675Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein, Cse3 family4e-1374.7
NC_007775:723925:734975734975735607633Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein, Cse3 family2e-1169.3
NC_012912:1053618:105628810562881056935648Dickeya zeae Ech1591, complete genomeCRISPR-associated protein, Cse3 family3e-1065.5
NC_013851:759500:764003764003764632630Allochromatium vinosum DSM 180 chromosome, complete genomeCRISPR-associated protein, Cse3 family5e-1064.7
NC_011894:5468500:549560154956015496332732Methylobacterium nodulans ORS 2060, complete genomeCRISPR-associated protein, Cse3 family4e-0961.6
NC_015387:942974:957719957719958339621Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Cse3 family1e-0859.7
NC_013850:985331:996967996967997671705Klebsiella variicola At-22 chromosome, complete genomeCRISPR-associated protein, Cse3 family2e-0859.3
NC_014355:1461355:147334514733451474043699Candidatus Nitrospira defluvii, complete genomeCRISPR-associated protein Cse32e-0858.9
NC_007333:1743890:183036718303671831065699Thermobifida fusca YX, complete genomehypothetical protein4e-0858.5
NC_015676:1663700:167048916704891671172684Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated protein, Cse3 family5e-0754.7
NC_007643:185135:201233201233201895663Rhodospirillum rubrum ATCC 11170, complete genomeCRISPR-associated CT1974 family protein9e-0753.9
NC_015436:1287873:129845112984511299047597Spirochaeta coccoides DSM 17374 chromosome, complete genomeCRISPR-associated protein, Cse3 family9e-0753.9