Pre_GI: BLASTP Hits

Some Help

Query: NC_010610:795975:812476 Lactobacillus fermentum IFO 3956, complete genome

Start: 812476, End: 813183, Length: 708

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014727:798191:816180816180816881702Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated protein3e-59228
NC_008529:735233:753026753026753727702Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated protein7e-59226
NC_008526:343445:353626353626354336711Lactobacillus casei ATCC 334, complete genomeCRISPR-associated protein9e-59226
NC_008054:745704:760882760882761583702Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein2e-58225
NC_015737:2146953:215817721581772158896720Clostridium sp. SY8519, complete genomehypothetical protein7e-38157
NC_006361:4574536:458656245865624587269708Nocardia farcinica IFM 10152, complete genomehypothetical protein5e-36150
NC_019673:1988853:203800820380082038724717Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated protein cas5 family protein5e-34144
NC_018720:1812000:181630818163081817021714Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein Cas51e-33143
NC_013131:4422000:443010544301054430842738Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein Cas5 family3e-32138
NC_007164:775000:779093779093779800708Corynebacterium jeikeium K411, complete genomehypothetical protein4e-31134
NC_007333:1743890:184050018405001841237738Thermobifida fusca YX, complete genomeCRISPR-associated CT1976 family protein2e-29129
NC_013510:3117837:313465131346513135355705Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein Cas5 family2e-28125
NC_015389:481282:493160493160493864705Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein, Cas5e family3e-28125
NC_014210:1588426:159214415921441592872729Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein Cas5 family3e-27121
NC_012590:977920:990201990201990917717Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein2e-24112
NC_016109:603829:615937615937616770834Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein4e-22105
NC_008609:2518993:252805925280592528757699Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein Cas5 family5e-22104
NC_008278:514600:526039526039526866828Frankia alni ACN14a, complete genomehypothetical protein4e-1994.7
NC_013159:1422370:143391014339101434620711Saccharomonospora viridis DSM 43017, complete genomeCRISPR-associated protein Cas58e-1994
NC_015951:107360:109267109267110130864Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated protein Cas5 family1e-1893.6
NC_007333:1743890:183106218310621831826765Thermobifida fusca YX, complete genomeCRISPR-associated CT1976 family protein3e-1892
NC_015387:942974:957079957079957744666Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas5 family6e-1890.9
NC_013890:1175931:118059511805951181212618Dehalococcoides sp. GT chromosome, complete genomeCRISPR-associated protein Cas5 family4e-1788.2
NC_007356:1165760:120474512047451205362618Dehalococcoides sp. CBDB1, complete genomehypothetical protein4e-1788.2
NC_007775:723925:735589735589736212624Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein Cas5, Ecoli subtype2e-1686.3
NC_015170:54000:658756587566579705Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated protein Cas5 family2e-1582.8
NC_014318:6395392:644556664455666446276711Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein6e-1477.8
NC_017186:6395435:644561064456106446320711Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein6e-1477.8
NC_015676:1663700:167117516711751671897723Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated protein Cas5 family2e-1376.3
NC_007643:185135:201892201892202677786Rhodospirillum rubrum ATCC 11170, complete genomeCRISPR-associated CT1976 family protein7e-1373.9
NC_014355:1461355:147253414725341473334801Candidatus Nitrospira defluvii, complete genomeCRISPR-associated protein Cas5e1e-1273.6
NC_008340:1075500:108152010815201082248729Alkalilimnicola ehrlichei MLHE-1, complete genomeCRISPR-associated protein Cas5 family1e-0963.2
NC_010468:1029471:104235110423511043025675Escherichia coli ATCC 8739, complete genomeCRISPR-associated protein Cas5 family2e-0962.4
NC_009800:2889928:289760728976072898287681Escherichia coli HS, complete genomeCRISPR-associated protein Cas5, Ecoli subtype3e-0962
NC_012759:2757826:276420827642082764882675Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-0860.5
NC_010473:2963951:297093829709382971612675Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein1e-0860.5
NC_000913:2873443:287839628783962879070675Escherichia coli K12, complete genomehypothetical protein1e-0860.5
AC_000091:2872000:287903028790302879704675Escherichia coli W3110 DNA, complete genomehypothetical protein1e-0860.5
NC_015436:1287873:130012813001281300826699Spirochaeta coccoides DSM 17374 chromosome, complete genomeCRISPR-associated protein Cas5 family1e-0860.1
NC_011894:5468500:549632954963295497150822Methylobacterium nodulans ORS 2060, complete genomeCRISPR-associated protein Cas5 family4e-0858.5
NC_012912:1053618:105449410544941055210717Dickeya zeae Ech1591, complete genomeCRISPR-associated protein Cas5 family4e-0858.5