Pre_GI: BLASTP Hits

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Query: NC_010610:1385066:1411176 Lactobacillus fermentum IFO 3956, complete genome

Start: 1411176, End: 1411451, Length: 276

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016605:1033000:103672710367271036999273Pediococcus claussenii ATCC BAA-344 chromosome, complete genome30S ribosomal protein S162e-37153
NC_015391:1013608:102776610277661028038273Carnobacterium sp. 17-4 chromosome, complete genome30S ribosomal protein S165e-35145
UCMB5137:1159520:117291911729191173191273Bacillus atrophaeus UCMB-513730S ribosomal protein S162e-32137
NC_014483:1973233:198069919806991980971273Paenibacillus polymyxa E681 chromosome, complete genome30S ribosomal protein S163e-32137
NC_009848:1542978:155411415541141554386273Bacillus pumilus SAFR-032, complete genome30S ribosomal protein S164e-32136
NC_011772:3821917:382869038286903828962273Bacillus cereus G9842, complete genomeribosomal protein S162e-31134
NC_012472:3705500:370575337057533706025273Bacillus cereus 03BB102, complete genome30S ribosomal protein S167e-31132
NC_005945:3636321:365894636589463659218273Bacillus anthracis str. Sterne, complete genome30S ribosomal protein S167e-31132
NC_003909:3606177:363365036336503633922273Bacillus cereus ATCC 10987, complete genome30S ribosomal protein S167e-31132
NC_007530:3616828:365837836583783658650273Bacillus anthracis str. 'Ames Ancestor', complete genome30S ribosomal protein S167e-31132
NC_006274:3736703:373880737388073739079273Bacillus cereus E33L, complete genome30S ribosomal protein S167e-31132
NC_008600:3686135:368774736877473688019273Bacillus thuringiensis str. Al Hakam, complete genomeribosomal protein S16 (30S ribosomal protein S16)7e-31132
NC_010184:3713359:371702637170263717298273Bacillus weihenstephanensis KBAB4, complete genomeribosomal protein S167e-31132
NC_005957:3665657:367992436799243680196273Bacillus thuringiensis serovar konkukian str. 97-27, complete30S ribosomal protein S167e-31132
NC_002973:1846000:184710518471051847377273Listeria monocytogenes str. 4b F2365, complete genomeribosomal protein S167e-31132
NC_003997:3617000:365825136582513658523273Bacillus anthracis str. Ames, complete genome30S ribosomal protein S167e-31132
NC_011658:3603009:364629936462993646571273Bacillus cereus AH187 chromosome, complete genome30S ribosomal protein S167e-31132
NC_017208:3816753:385836538583653858637273Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete30S ribosomal protein S167e-31132
NC_017200:3701043:370265537026553702927273Bacillus thuringiensis serovar finitimus YBT-020 chromosome,30S ribosomal protein S167e-31132
NC_016779:3621973:362358436235843623856273Bacillus cereus F837/76 chromosome, complete genome30S ribosomal protein S167e-31132
NC_014171:3726054:374223337422333742505273Bacillus thuringiensis BMB171 chromosome, complete genome30S ribosomal protein S167e-31132
NC_012659:3617000:365827836582783658550273Bacillus anthracis str. A0248, complete genome30S ribosomal protein S167e-31132
NC_012581:559182:580037580037580309273Bacillus anthracis str. CDC 684 chromosome, complete genome30S ribosomal protein S167e-31132
NC_011969:3575988:359025835902583590530273Bacillus cereus Q1 chromosome, complete genome30S ribosomal protein S167e-31132
NC_011773:3689473:369314136931413693413273Bacillus cereus AH820 chromosome, complete genome30S ribosomal protein S167e-31132
NC_011725:3862094:386297338629733863245273Bacillus cereus B4264 chromosome, complete genome30S ribosomal protein S167e-31132
NC_010382:1607013:162099916209991621271273Lysinibacillus sphaericus C3-41, complete genome30S ribosomal protein S162e-30130
NC_014335:3589726:360910536091053609377273Bacillus cereus biovar anthracis str. CI chromosome, complete30S ribosomal protein S165e-30129
NC_010520:2635750:264296326429632643211249Clostridium botulinum A3 str. Loch Maree, complete genomeribosomal protein S162e-27120
NC_010516:2567911:256815925681592568407249Clostridium botulinum B1 str. Okra, complete genomeribosomal protein S162e-27120
NC_009495:2571732:257994525799452580193249Clostridium botulinum A str. ATCC 3502 chromosome, complete genome30S ribosomal protein S162e-27120
NC_009698:2420484:242431224243122424560249Clostridium botulinum A str. Hall chromosome, complete genome30S ribosomal protein S165e-27119
NC_020164:1590221:159745315974531597728276Staphylococcus warneri SG1, complete genome30S ribosomal protein S168e-27119
NC_016584:4860360:488081748808174881083267Desulfosporosinus orientis DSM 765 chromosome, complete genome30S ribosomal protein S163e-26117
NC_014328:1379437:138940113894011389658258Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeribosomal protein S161e-25115
NC_010003:335348:345410345410345745336Petrotoga mobilis SJ95, complete genomeribosomal protein S161e-24112
NC_020291:1437431:144746614474661447711246Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome30S ribosomal protein S169e-25112
NC_018664:1699618:170040317004031700702300Clostridium acidurici 9a chromosome, complete genome30S ribosomal protein S161e-24111
NC_014624:2668157:267338826733882673633246Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein8e-23105
NC_014654:1529500:153656015365601536823264Halanaerobium sp. 'sapolanicus' chromosome, complete genomeribosomal protein S162e-22104
NC_015164:1503352:151753615175361518087552Bacteroides salanitronis DSM 18170 chromosome, complete genome30S ribosomal protein S161e-21101
NC_003911:3453764:345412534541253454490366Silicibacter pomeroyi DSS-3, complete genomeribosomal protein S161e-21101
NC_010673:703816:742996742996743247252Borrelia hermsii DAH, complete genomeSSU ribosomal protein S16P3e-21100
NC_011244:746801:754959754959755210252Borrelia recurrentis A1, complete genome30S ribosomal protein S165e-2199.8
NC_008710:703740:740284740284740535252Borrelia turicatae 91E135, complete genomeSSU ribosomal protein S16P7e-2199
NC_009511:2921448:293911929391192939583465Sphingomonas wittichii RW1 chromosome, complete genome30S ribosomal protein S161e-2098.6
NC_014033:1808782:181102718110271811569543Prevotella ruminicola 23 chromosome, complete genome30S ribosomal protein S163e-2097.1
NC_014960:1735786:179254717925471792894348Anaerolinea thermophila UNI-1, complete genome30S ribosomal protein S162e-1994.4
NC_015732:529201:535758535758536006249Spirochaeta caldaria DSM 7334 chromosome, complete genome30S ribosomal protein S162e-1994.4
NC_011297:1357947:136280313628031363084282Dictyoglomus thermophilum H-6-12, complete genomeribosomal protein S164e-1993.2
NC_011661:1542335:154719215471921547473282Dictyoglomus turgidum DSM 6724, complete genomeribosomal protein S161e-1891.7
NC_018720:417500:435981435981436439459Bifidobacterium asteroides PRL2011 chromosome, complete genome30S ribosomal protein S162e-1891.3
NC_010336:1117325:114365211436521143900249Francisella philomiragia subsp. philomiragia ATCC 25017, complete30S ribosomal protein S164e-1890.1
NC_006570:141966:167609167609167857249Francisella tularensis subsp. tularensis Schu 4, complete genome30S ribosomal protein S164e-1890.1
NC_008601:1658454:165900716590071659255249Francisella tularensis subsp. novicida U112, complete genome30S ribosomal protein S164e-1890.1
NC_010677:214712:240228240228240476249Francisella tularensis subsp. mediasiatica FSC147, complete genome30S ribosomal protein S164e-1890.1
NC_008245:141982:167625167625167873249Francisella tularensis subsp. tularensis FSC 198, complete genome30S ribosomal protein S164e-1890.1
NC_009257:226417:252060252060252308249Francisella tularensis subsp. tularensis WY96-3418 chromosome,30S ribosomal protein S164e-1890.1
NC_016933:141984:167627167627167875249Francisella tularensis TIGB03 chromosome, complete genome30S ribosomal protein S164e-1890.1
NC_016937:141984:167627167627167875249Francisella tularensis subsp. tularensis TI0902 chromosome,30S ribosomal protein S164e-1890.1
NC_015873:1193843:119525011952501195519270Megasphaera elsdenii DSM 20460, complete genome30S ribosomal protein S166e-1889.4
NC_007880:1667922:166847416684741668722249Francisella tularensis subsp. holarctica, complete genome30S ribosomal protein S163e-1787.4
NC_008369:1667437:166798916679891668237249Francisella tularensis subsp. holarctica OSU18, complete genomeribosomal protein S163e-1787.4
NC_016633:541559:544051544051544317267Sphaerochaeta pleomorpha str. Grapes chromosome, complete genome30S ribosomal protein S161e-1684.7
NC_009749:1663500:166424016642401664473234Francisella tularensis subsp. holarctica FTA, complete genomeribosomal protein S165e-1683.2
NC_012026:21385:380753807538344270Anaplasma marginale str. Florida, complete genome30S ribosomal protein S16 (rpsP)5e-1682.8
NC_008767:549351:565681565681565926246Neisseria meningitidis FAM18, complete genomeputative 30S ribosomal protein S161e-1582
NC_003112:603879:622890622890623135246Neisseria meningitidis MC58, complete genome30S ribosomal protein S161e-1582
NC_013016:500789:521127521127521372246Neisseria meningitidis alpha14 chromosome, complete genome30S ribosomal protein S161e-1582
NC_017501:1750580:175305117530511753296246Neisseria meningitidis 8013, complete genome30S ribosomal protein S161e-1582
NC_017513:548882:568488568488568733246Neisseria meningitidis G2136 chromosome, complete genome30S ribosomal protein S161e-1582
NC_017515:1653306:166858916685891668834246Neisseria meningitidis M04-240196 chromosome, complete genome30S ribosomal protein S161e-1582
NC_017517:635235:653381653381653626246Neisseria meningitidis M01-240355 chromosome, complete genome30S ribosomal protein S161e-1582
NC_017518:672790:694814694814695059246Neisseria meningitidis NZ-05/33 chromosome, complete genome30S ribosomal protein S161e-1582
NC_015380:412277:417180417180417767588Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeSSU ribosomal protein S16p2e-1581.3
NC_012115:1415827:141723914172391417484246Nautilia profundicola AmH, complete genomeribosomal protein S162e-1580.9
NC_014166:2498500:250188025018802502110231Arcobacter nitrofigilis DSM 7299 chromosome, complete genome30S ribosomal protein S163e-1580.5
NC_017192:2469667:248708924870892487316228Arcobacter sp. L, complete genome30S ribosomal protein S167e-1579.3
NC_010572:2216309:223669322366932237133441Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative 30S ribosomal protein S161e-1478.6
NC_002935:1534889:155321115532111553684474Corynebacterium diphtheriae NCTC 13129, complete genome30S ribosomal protein S161e-1478.2
NC_016782:1520324:153865215386521539125474Corynebacterium diphtheriae 241 chromosome, complete genome30S ribosomal protein S161e-1478.2
NC_016787:1509831:153021915302191530686468Corynebacterium diphtheriae HC03 chromosome, complete genome30S ribosomal protein S161e-1478.2
CP002516:1165726:118873911887391188987249Escherichia coli KO11, complete genomeribosomal protein S161e-1478.2
NC_011740:448000:469044469044469292249Escherichia fergusonii ATCC 35469, complete genome30S ribosomal subunit protein S161e-1478.2
NC_012947:1106000:112720511272051127453249Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete30S ribosomal protein S161e-1478.2
NC_016902:1165726:118873911887391188987249Escherichia coli KO11FL chromosome, complete genome30S ribosomal protein S161e-1478.2
NC_007947:2447635:248924124892412489489249Methylobacillus flagellatus KT, complete genomeribosomal protein S162e-1477.8
NC_014643:2354507:237483723748372375268432Rothia dentocariosa ATCC 17931 chromosome, complete genome30S ribosomal protein S163e-1477.4
NC_016845:4077293:408697140869714087219249Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,30S ribosomal protein S166e-1476.3
NC_007645:1785000:179700817970081797361354Hahella chejuensis KCTC 2396, complete genomeribosomal protein S168e-1475.9
NC_020064:871338:875223875223875471249Serratia marcescens FGI94, complete genomeSSU ribosomal protein S16P7e-1475.9
NC_014012:1097938:112089911208991121150252Shewanella violacea DSS12, complete genomeribosomal protein S167e-1475.9
NC_014733:2363838:238939823893982389649252Methylovorus sp. MP688 chromosome, complete genomeribosomal protein s161e-1375.5
NC_007798:80500:101663101663101920258Neorickettsia sennetsu str. Miyayama, complete genomeribosomal protein S164e-1373.6
NC_020411:215432:254758254758255009252Hydrogenobaculum sp. HO, complete genomeribosomal protein S163e-1373.6
NC_015557:215397:254725254725254976252Hydrogenobaculum sp. 3684 chromosome, complete genome30S ribosomal protein S163e-1373.6
NC_015587:215433:254761254761255012252Hydrogenobaculum sp. SHO chromosome, complete genome30S ribosomal protein S163e-1373.6
NC_014644:1363445:136523913652391365700462Gardnerella vaginalis ATCC 14019 chromosome, complete genome30S ribosomal protein S165e-1373.2
NC_010995:1648897:166765916676591667952294Cellvibrio japonicus Ueda107, complete genomeribosomal protein S166e-1372.8
NC_018677:329829:342436342436342684249Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeSSU ribosomal protein S16p3e-1270.5
NC_018507:339000:349019349019349267249Candidatus Portiera aleyrodidarum BT-B chromosome, complete genome30S ribosomal protein S163e-1270.5
NC_010730:1211506:121512912151291215371243Sulfurihydrogenibium sp. YO3AOP1, complete genomeribosomal protein S167e-1269.3
NC_015064:2494000:249661024966102496861252Acidobacterium sp. MP5ACTX9 chromosome, complete genomeribosomal protein S161e-1065.1
NC_014109:27500:433764337643639264Candidatus Riesia pediculicola USDA chromosome, complete genomeribosomal protein S163e-0753.9