Pre_GI: BLASTP Hits

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Query: NC_010610:1385066:1400770 Lactobacillus fermentum IFO 3956, complete genome

Start: 1400770, End: 1403208, Length: 2439

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008942:815280:8345898345898370932505Methanocorpusculum labreanum Z, complete genomehypothetical protein4e-113409
NC_006513:1949751:1959781195978119622672487Azoarcus sp. EbN1, complete genomepredicted CRISPR-associated helicase1e-104381
NC_010995:2798000:2807956280795628104092454Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated helicase Cas3 domain protein2e-97357
NC_013714:1830959:1842567184256718451102544Bifidobacterium dentium Bd1, complete genomeCRISPR-associated helicase Cas31e-94348
NC_021175:353292:3564363564363588502415Streptococcus oligofermentans AS 1.3089, complete genomehypothetical protein4e-92339
NC_008618:1456000:1468122146812214705392418Bifidobacterium adolescentis ATCC 15703, complete genomepredicted CRISPR-associated helicase3e-91337
NC_007759:2748000:2758821275882127613282508Syntrophus aciditrophicus SB, complete genomeATP-dependent RNA helicase5e-91336
NC_009523:5438000:5448155544815554508692715Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated helicase Cas33e-91336
NC_017218:1655009:1666981166698116694192439Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeCRISPR-associated helicase Cas33e-87323
NC_012470:1606000:1612460161246016149132454Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated helicase2e-78294
NC_016584:1912000:1918122191812219205692448Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD4e-78293
NC_016630:28410:3300133001355892589Filifactor alocis ATCC 35896 chromosome, complete genomeATP-dependent RNA helicase6e-77289
NC_015677:3685452:3691484369148436937722289Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein1e-71271
NC_014960:1380500:1389942138994213931483207Anaerolinea thermophila UNI-1, complete genomehypothetical protein5e-70266
NC_013740:842841:8744968744968766822187Acidaminococcus fermentans DSM 20731, complete genomemetal dependent phosphohydrolase5e-70266
NC_015873:2197412:2197412219741221996042193Megasphaera elsdenii DSM 20460, complete genomemetal dependent phosphohydrolase1e-69265
NC_005085:1269787:1285455128545512875362082Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-67257
NC_011963:1979136:1986779198677919890132235Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCRISPR-associated helicase, Cas3 family3e-66254
NC_007947:621213:6246826246826269192238Methylobacillus flagellatus KT, complete genomemetal dependent phosphohydrolase3e-66253
NC_014364:1116439:1120569112056911227942226Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated helicase Cas38e-65249
NC_014221:1786122:1788888178888817912062319Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated helicase Cas33e-64247
NC_014484:447889:4532194532194555282310Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein4e-64246
NC_004757:905417:9093379093379113792043Nitrosomonas europaea ATCC 19718, complete genomeDEAD/DEAH box helicase:HD domain1e-63245
NC_019968:8397:1357413574157692196Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD3e-63244
NC_006177:324363:3470963470963492552160Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein1e-61238
NC_011060:1746000:1754304175430417565232220Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated helicase Cas31e-61238
NC_020126:9726992:9738646973864697408802235Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated helicase Cas39e-61235
NC_009615:1354122:1372739137273913749642226Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase2e-60234
NC_007777:3962000:3963334396333439655892256Frankia sp. CcI3, complete genomeCRISPR-associated helicase Cas3, core6e-60233
NC_009337:1448607:1453899145389914558961998Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated helicase Cas3 family protein9e-60232
NC_007512:1459685:1465575146557514676532079Pelodictyon luteolum DSM 273, complete genomeCRISPR-associated helicase Cas3, core3e-59230
NC_015976:1893076:1907423190742319097742352Sphingobium sp. SYK-6, complete genomeCRISPR-associated helicase Cas31e-58228
NC_015387:261799:2664582664582685932136Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemetal dependent phosphohydrolase3e-58227
NC_013204:2305140:2318079231807923202772199Eggerthella lenta DSM 2243, complete genomemetal dependent phosphohydrolase1e-56222
NC_013947:3785332:3796425379642537987042280Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeCRISPR-associated helicase Cas34e-54213
NC_012438:776260:7906217906217929092289Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeCRISPR-associated helicase Cas33e-44180
NC_007681:482445:4859174859174883042388Methanosphaera stadtmanae DSM 3091, complete genomepredicted helicase6e-44179
NC_015416:2723189:2751286275128627537542469Methanosaeta concilii GP-6 chromosome, complete genomecrispr-associated helicase Cas31e-43178
NC_011899:1603500:1626098162609816285662469Halothermothrix orenii H 168, complete genomeCRISPR-associated helicase Cas38e-43176
NC_014915:332784:3446143446143469442331Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated HD domain protein5e-42173
NC_015660:3467579:3467579346757934700622484Geobacillus thermoglucosidasius C56-YS93 chromosome, completeCRISPR-associated HD domain-containing protein6e-42173
NC_019673:2051363:2085060208506020872942235Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated helicase Cas3 family protein protein5e-40166
NC_013799:1117750:1126830112683011291362307Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated helicase7e-39162
NC_017161:1117741:1126688112668811289942307Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCRISPR-associated helicase Cas37e-39162
NC_014098:2735500:2740062274006227426232562Bacillus tusciae DSM 2912 chromosome, complete genomeCRISPR-associated helicase Cas32e-38161
NC_021184:823000:8283508283508306982349Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD3e-38160
NC_008148:258292:2745562745562770212466Rubrobacter xylanophilus DSM 9941, complete genomeCRISPR-associated helicase Cas3, core6e-38159
NC_012108:616088:6267306267306289912262Desulfobacterium autotrophicum HRM2, complete genomeputative CRISPR-associated helicase Cas3 (ATP-dependent DNA helicase)8e-38159
NC_014209:2204515:2217893221789322202472355Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated helicase Cas33e-37157
NC_010003:2056000:2075621207562120778132193Petrotoga mobilis SJ95, complete genomeCRISPR-associated helicase Cas34e-36153
NC_015589:3053504:3063199306319930655742376Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated HD domain-containing protein2e-34148
NC_013526:567500:5765085765085790842577Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated helicase Cas31e-31138
NC_014935:1047411:1058060105806010602372178Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecrispr-associated helicase, cas3 family1e-30135
NC_009715:873280:8808488808488830222175Campylobacter curvus 525.92 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein3e-30134
NC_003901:678340:6852926852926877242433Methanosarcina mazei Go1, complete genomehypothetical protein2e-29131
NC_015387:2072237:2079360207936020816362277Marinithermus hydrothermalis DSM 14884 chromosome, complete genomemetal dependent phosphohydrolase1e-28129
NC_007681:1082000:1085878108587810886312754Methanosphaera stadtmanae DSM 3091, complete genomepredicted helicase1e-27125
NC_007955:1198994:1207778120777812104202643Methanococcoides burtonii DSM 6242, complete genomeCRISPR-associated helicase Cas39e-27122
NC_019897:3251639:3287049328704932894392391Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated helicase Cas31e-25119
NC_015757:2343193:2373204237320423755702367Sulfobacillus acidophilus TPY chromosome, complete genomeCRISPR-associated helicase Cas32e-24115
NC_016884:3219030:3251274325127432536402367Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeCRISPR-associated HD domain-containing protein2e-24115
NC_017278:258921:2589212589212611582238Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein2e-24114
NC_019942:1370872:1377646137764613798472202Aciduliprofundum sp. MAR08-339, complete genomeDEAD/DEAH box helicase2e-1998.6
NC_015634:2492771:2505441250544125079872547Bacillus coagulans 2-6 chromosome, complete genomeCRISPR-associated endonuclease Cas5e-1997.1
NC_021184:504728:5252555252555276392385Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD2e-1895.1
NC_016609:5986500:5992325599232559950962772Niastella koreensis GR20-10 chromosome, complete genomeCRISPR-associated HD domain-containing protein6e-1790.1
NC_014624:140000:1452031452031477882586Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-1481.3
NC_000961:135493:1538931538931559652073Pyrococcus horikoshii OT3, complete genomehypothetical protein6e-1480.1
NC_014206:1467000:1474954147495414771312178Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated helicase Cas32e-1378.6
NC_000918:246792:2467922467922489812190Aquifex aeolicus VF5, complete genomehypothetical protein9e-1376.3
NC_013223:1848689:1869714186971418720562343Desulfohalobium retbaense DSM 5692, complete genomeCRISPR-associated helicase Cas31e-1276.3
NC_012440:1249941:1259969125996912622182250Persephonella marina EX-H1, complete genomecrispr-associated helicase Cas31e-1275.9
NC_016051:460624:4687704687704713762607Thermococcus sp. AM4 chromosome, complete genomeCRISPR-associated helicase Cas36e-1273.6
NC_015966:1316901:1323321132332113254982178Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomemetal dependent phosphohydrolase2e-1171.6
NC_015975:1056731:1070620107062010729322313Lactobacillus ruminis ATCC 27782 chromosome, complete genomeCRISPR-associated helicase Cas32e-1068.6
NC_020134:2067476:2074883207488320770962214Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated helicase Cas36e-1067
NC_020411:583503:5965795965795988702292Hydrogenobaculum sp. HO, complete genomeCRISPR-associated helicase Cas37e-1066.6
NC_015587:583530:5966065966065988972292Hydrogenobaculum sp. SHO chromosome, complete genomeCRISPR-associated helicase Cas37e-1066.6
NC_015557:583475:5965515965515988422292Hydrogenobaculum sp. 3684 chromosome, complete genomeCRISPR-associated helicase Cas37e-1066.6
NC_017096:260333:2653822653822676282247Caldisericum exile AZM16c01, complete genomeputative CRISPR-associated protein7e-1066.6
NC_000916:983500:1001172100117210036642493Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein1e-0965.9
NC_013502:102430:373728382802Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequenceCRISPR-associated helicase Cas3, Anaes-subtype1e-0862.4
NC_013216:921377:9279929279929302262235Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated helicase Cas32e-0862
NC_020134:1783000:1791244179124417935892346Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD4e-0860.8
NC_015680:1275252:1275252127525212773302079Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas3 domain-containing protein6e-0860.5
NC_013894:1:1428214282159881707Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated helicase Cas35e-0860.5
NC_011296:1039749:1058944105894410605751632Thermodesulfovibrio yellowstonii DSM 11347, complete genomeCRISPR-associated helicase Cas38e-0859.7
NC_015573:2975000:2983739298373929862492511Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeCRISPR-associated helicase Cas32e-0758.9
NC_000917:1666836:1685466168546616871061641Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein3e-0757.8
NC_004342:3164500:3167477316747731697352259Leptospira interrogans serovar Lai str. 56601 chromosome I,ATP-dependent RNA helicase3e-0757.8
NC_005823:1105524:1130506113050611327582253Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130ATP-dependent RNA helicase3e-0757.8
NC_015416:2838020:2843201284320128456032403Methanosaeta concilii GP-6 chromosome, complete genomeCRISPR-associated helicase Cas34e-0757.4
NC_016645:797000:8060948060948075661473Pyrobaculum sp. 1860 chromosome, complete genomeCRISPR-associated helicase Cas35e-0757.4
NC_015680:841783:8449328449328471092178Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated helicase Cas32e-0655.5
NC_009973:77518:9643396433988472415Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeCRISPR-associated helicase Cas32e-0655.1
NC_009486:1103915:1112028111202811143192292Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated helicase Cas36e-0653.5