Pre_GI: BLASTP Hits

Some Help

Query: NC_010610:1385066:1398678 Lactobacillus fermentum IFO 3956, complete genome

Start: 1398678, End: 1399418, Length: 741

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008942:815280:833847833847834560714Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-67255
NC_009523:5438000:544741554474155448143729Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated Cas5 family protein3e-65248
NC_006513:1949751:195906019590601959788729Azoarcus sp. EbN1, complete genomehypothetical protein3e-62238
NC_010995:2798000:280724328072432807947705Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated protein Cas5, Dvulg subtype1e-60233
NC_008618:1456000:146713414671341467856723Bifidobacterium adolescentis ATCC 15703, complete genomeCRISPR-associated protein_ CT11346e-58224
NC_016584:1912000:192058619205861921329744Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated protein Cas5, subtype I-C/DVULG3e-57221
NC_007759:2748000:275805827580582758828771Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein1e-54213
NC_010381:92000:108027108027108755729Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequencehypothetical protein4e-51201
NC_013714:1830959:184184118418411842422582Bifidobacterium dentium Bd1, complete genomeCRISPR-associated Cas5 family protein7e-46183
NC_021175:353292:359095359095359823729Streptococcus oligofermentans AS 1.3089, complete genomeCRISPR-associated protein cas55e-41167
NC_017218:1655009:166627116662711666813543Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome5e-38157
NC_012470:1606000:161098616109861611729744Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated protein2e-36152
NC_016630:28410:357773577736520744Filifactor alocis ATCC 35896 chromosome, complete genomeCRISPR-associated protein Cas51e-32140
NC_014364:1116439:112280411228041123466663Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated protein Cas5 family6e-1477.8
NC_007512:1459685:146767714676771468390714Pelodictyon luteolum DSM 273, complete genomeCRISPR-associated CT1134 family protein3e-1375.5
NC_011060:1746000:175654217565421757177636Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein Cas5 family1e-1273.6
NC_005085:1269787:128782312878231288518696Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein7e-1270.9
NC_019968:8397:157321573216463732Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated protein Cas5, subtype I-C/DVULG2e-1169.7
NC_007947:621213:627026627026627703678Methylobacillus flagellatus KT, complete genomeCRISPR-associated protein, CT11343e-1168.9
NC_008741:15699:374223742238105684Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,CRISPR-associated protein Cas5 family7e-1167.8
NC_014484:447889:455565455565456203639Spirochaeta thermophila DSM 6192 chromosome, complete genomeCRISPR-associated protein Cas5 family8e-1167.4
NC_014960:1380500:138919213891921389863672Anaerolinea thermophila UNI-1, complete genomehypothetical protein5e-1065.1
NC_013947:3785332:379573337957333796428696Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeCas5 family CRISPR-associated protein1e-0963.5
NC_013204:2305140:231718623171862317848663Eggerthella lenta DSM 2243, complete genomeCRISPR-associated protein Cas5 family2e-0963.2
NC_016012:665171:665171665171665851681Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeCRISPR-associated protein Cas5 family4e-0962
NC_009337:1448607:145591914559191456629711Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated RAMP Csd5d family protein1e-0860.5
NC_007777:3962000:396558639655863966251666Frankia sp. CcI3, complete genomehypothetical protein7e-0857.8
NC_015976:1893076:190992819099281910593666Sphingobium sp. SYK-6, complete genomeCRISPR-associated protein Cas51e-0757
NC_019673:2051363:208729120872912088007717Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-0755.5
NC_015387:261799:268605268605269294690Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas5 family5e-0755.1