Pre_GI: BLASTP Hits

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Query: NC_010610:1385066:1395880 Lactobacillus fermentum IFO 3956, complete genome

Start: 1395880, End: 1396758, Length: 879

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017203:179468:181390181390182250861Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281,CRISPR-associated protein, Csd21e-75283
NC_016584:1912000:192345219234521924306855Desulfosporosinus orientis DSM 765 chromosome, complete genomeCRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG6e-69260
NC_017218:1655009:166345516634551664306852Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomehypothetical protein7e-68257
NC_008618:1456000:146432914643291465174846Bifidobacterium adolescentis ATCC 15703, complete genomeCRISPR-associated protein TM18013e-66251
NC_008942:815280:830976830976831899924Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-64246
NC_006513:1949751:195637119563711957213843Azoarcus sp. EbN1, complete genomehypothetical protein4e-62238
NC_009523:5438000:544446354444635445437975Roseiflexus sp. RS-1 chromosome, complete genomeCRISPR-associated Csd2 family protein7e-62237
NC_012470:1606000:160825416082541609102849Streptococcus equi subsp. zooepidemicus, complete genomeCRISPR-associated protein4e-59228
NC_010995:2798000:280438928043892805222834Cellvibrio japonicus Ueda107, complete genomeCRISPR-associated protein, Csd2 family2e-56219
NC_021175:353292:361756361756362607852Streptococcus oligofermentans AS 1.3089, complete genomeCRISPR-associated protein csd23e-56218
NC_007759:2748000:275523727552372756112876Syntrophus aciditrophicus SB, complete genomehypothetical cytosolic protein3e-55215
NC_016630:28410:384323843239274843Filifactor alocis ATCC 35896 chromosome, complete genomeCRISPR-associated protein, Csd2 family1e-52206
NC_010381:92000:105341105341106198858Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequencehypothetical protein3e-51202
NC_007512:1459685:147014414701441471043900Pelodictyon luteolum DSM 273, complete genomeCRISPR-associated TM1801 family protein2e-25115
NC_019968:8397:182361823619081846Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG5e-25115
NC_009337:1448607:145836814583681459216849Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated Csd2 family protein3e-24112
NC_009615:1354122:137740113774011378252852Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein3e-24112
NC_016012:665171:667689667689668555867Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeCRISPR-associated Csh2 family protein1e-23110
NC_014960:1380500:138634113863411387207867Anaerolinea thermophila UNI-1, complete genomehypothetical protein3e-22105
NC_007947:621213:629533629533630414882Methylobacillus flagellatus KT, complete genomeCRISPR-associated protein TM18012e-21103
NC_013740:842841:879139879139880035897Acidaminococcus fermentans DSM 20731, complete genomeCRISPR-associated protein, Csd2 family2e-21103
NC_013204:2305140:231453823145382315437900Eggerthella lenta DSM 2243, complete genomeCRISPR-associated protein, Csd2 family1e-21103
NC_020126:9726992:973525597352559736166912Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated RAMP Csd3 family protein2e-21102
NC_008741:15699:347513475135623873Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,CRISPR-associated protein, Csd2 family3e-21102
NC_005085:1269787:129030112903011291167867Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-20100
NC_015677:3685452:369631836963183697199882Ramlibacter tataouinensis TTB310 chromosome, complete genomeCRISPR-associated protein2e-1996.7
NC_014364:1116439:112523511252351126101867Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated protein, Csd2 family4e-1995.5
NC_014933:3637172:366008436600843661010927Bacteroides helcogenes P 36-108 chromosome, complete genomeCRISPR-associated protein, Csd2 family1e-1893.6
NC_014484:447889:458002458002458877876Spirochaeta thermophila DSM 6192 chromosome, complete genomeCRISPR-associated protein, Csd2 family2e-1893.2
NC_011963:1979136:199194619919461992821876Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCRISPR-associated protein, TM1801 family4e-1788.6
NC_015976:1893076:191239219123921913324933Sphingobium sp. SYK-6, complete genomeCRISPR-associated protein Csd25e-1788.6
NC_014221:1786122:179380717938071794706900Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein, Csd2 family4e-1685.5
NC_013947:3785332:379300337930033793884882Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeCsd2 family CRISPR-associated protein4e-1685.5
NC_007777:3962000:396822539682253969112888Frankia sp. CcI3, complete genomeCRISPR-associated protein TM18014e-1582.4
NC_011060:1746000:1758864175886417599041041Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein, Csd2 family9e-1580.9
NC_015387:261799:271091271091271960870Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Csd2 family4e-1478.6
NC_019673:2051363:208995220899522090824873Saccharothrix espanaensis DSM 44229 complete genomeCsd2 family CRISPR-associated protein6e-1478.2
NC_017203:179468:184488184488184706219Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281,CRISPR-associated protein, Csd29e-1374.3
NC_017511:602000:612766612766613308543Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein2e-1273.6
NC_006177:324363:3517423517423528541113Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein8e-1167.8
NC_017161:1117741:112971711297171130619903Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCsh2 family CRISPR-associated protein1e-0964.3
NC_013799:1117750:112985911298591130761903Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated protein1e-0964.3
NC_003901:678340:688397688397689272876Methanosarcina mazei Go1, complete genomehypothetical protein2e-0963.5
NC_019897:3251639:329013032901303291092963Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated protein, CT1132 family6e-0961.6
NC_017278:258921:263781263781264740960Thermus sp. CCB_US3_UF1 chromosome, complete genomeCRISPR-associated protein, Csh21e-0860.5
NC_014209:2204515:222095722209572221871915Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated protein, Csh2 family5e-0858.9
NC_015589:3053504:306629630662963067273978Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated protein Csh2 family5e-0755.1
NC_013526:567500:574746574746575705960Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein, Csh2 family1e-0653.9
NC_015416:2723189:275445027544502755370921Methanosaeta concilii GP-6 chromosome, complete genomecrispr-associated protein, Csh2 family2e-0653.1
NC_017203:179468:183772183772183996225Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281,CRISPR-associated protein, Csd23e-0652.8
NC_007681:482445:484255484255485214960Methanosphaera stadtmanae DSM 3091, complete genomehypothetical protein6e-0651.6